Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1 105 6e-18 >seq1 Length=4889271 Score = 105 bits (116), Expect = 6e-18 Identities = 400/624 (64%), Gaps = 29/624 (5%) Strand=Plus/Plus Query 20159 AGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTAGATGTGGGCATCTCCCAACGTGTGA 20218 |||||| | | | || || ||||| |||||| | ||| ||||| |||| |||||| Sbjct 1781348 AGCTGCTCCTGCAATGCTTCGATATGATCTTTGTAAACGTGAGCATCGCCCATAGTGTGA 1781407 Query 20219 ATAAACTCCCCGG-GTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATA 20277 || ||||| ||| ||| | | | | ||| | ||||| ||| | || || | | ||| Sbjct 1781408 ATGAACTCACCGCAGTCCATGTC-ACAAACTTCAGCAATCATTTTGGTCAACAATGCATA 1781466 Query 20278 GCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACA 20337 ||||| || || || ||||| | ||||| || | || || ||||||| ||| Sbjct 1781467 AGAAGCAATATTGAATGGCACTCCAAGTCCCATATCACAGGATCTTTGATACA----ACA 1781522 Query 20338 GGAAAGCTCACC----GTCAGCT----------------ACATAAAATTGACATAACAAG 20377 | || |||| | ||| || || ||||| |||| |||| | Sbjct 1781523 AGCAA-CTCAACTTTGGTCTGCCTTCTTTGGGGAAATTCACGTAAAACTGACTAAACACG 1781581 Query 20378 TGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATT 20437 || || ||||| | |||||| | || || | |||||||| ||| ||||||||||| Sbjct 1781582 TGGCATGGCGGTAATGCCATCTTTGGAAAATCTGGAGGGTTCCAAGCAGACATAATGATT 1781641 Query 20438 CTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCAAACCCC 20497 |||||||| | ||||| |||| | | || | || | | | ||| |||| ||| Sbjct 1781642 CTTCTATCATATGGATTGGTTTTCAATTTATGGATAACTTGGGCTAGTTGATCAACTCCC 1781701 Query 20498 TGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAA 20557 ||||| | ||||||| ||| ||| || || ||||| || ||||| || || Sbjct 1781702 TGGCCCGAGTAGTCAGTATCACAGTCTTTATATTTAGCACCAAAATGTCTCCATTGAAAT 1781761 Query 20558 CCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAAC 20617 || || |||||||| | ||| || || || | | | || || ||| | Sbjct 1781762 CCATACACAGGTCCAAGATCGCCTTCTCTGTTATTTGTCAACCCAATTGAATCCAAATAT 1781821 Query 20618 TCCCTGGAGCCATTTTTGTCCCATATCTTGAC-TCCTGTTCTTGAAAGCTCCCTGGAGTC 20676 || ||| || || ||||| |||||||| | ||||| ||||||| | || || Sbjct 1781822 TCTCTGCTACCGTTGCCTTCCCAAATCTTGACATTTTGTTC-GGAAAGCTTCTTGCCATC 1781880 Query 20677 AGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACACCCGCTT 20736 || | ||||| | ||||||||||| ||| | | ||||| |||| || ||| Sbjct 1781881 GGTGCAGCCCTTGATAAACCAAAGCAACTCCAAGATAATGCCTCTGGAAAAGACTTTCTT 1781940 Query 20737 TGTGGTTAGTAAGGGAAAGTGGTC 20760 ||||| | ||| || || || || Sbjct 1781941 GGTGGTCAATAATGGGAACTGATC 1781964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372761379880