Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 8e-15 seq1 86.0 1e-11 >seq4 Length=2649207 Score = 96.9 bits (106), Expect = 8e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||||||||| ||||| | || || | || ||||| |||||||| || || || Sbjct 2557250 TTCTTTTTGGATATTGTAGTCAGAAAGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAA 2557309 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | ||||| | ||| || |||||||| || || || || | ||| || || Sbjct 2557310 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGAATCTTGGATTTGACATT 2557369 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||||| ||||| | || || || || || |||| ||| || || Sbjct 2557370 GTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAAC 2557429 Query 288462 GAA 288464 ||| Sbjct 2557430 GAA 2557432 >seq1 Length=4889271 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 135623 TGGGTTATTTTCGATGAAGTTCACTATATCAATGATAAGTCTCGAGGTTCCGTGTGGGAA 135682 ||||| ||||| ||||||||||| || || | |||||| || ||||| || |||||| Sbjct 4532738 TGGGTGATTTTTGATGAAGTTCATTACATGAGGGATAAGGCTAGAGGTGTTGTTTGGGAA 4532679 Query 135683 GAATCGATAATTCTGATGCCGGATACGATGCGTGCTGTGTTTTTGTCAGCAACGGTTCCG 135742 ||| | || || || |||| |||| | ||| | |||||||||||| || || |||| Sbjct 4532678 GAAACTATTATCTTGTTGCCTGATAAGGTGCATTATGTGTTTTTGTCCGCTACCATTCCT 4532619 Query 135743 AA 135744 || Sbjct 4532618 AA 4532617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654294199746