Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 1e-13 seq3 89.7 5e-13 >seq4 Length=2649207 Score = 91.5 bits (100), Expect = 1e-13 Identities = 164/232 (71%), Gaps = 7/232 (3%) Strand=Plus/Plus Query 138378 GTAGCCGCAGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTT 138437 |||| ||| || |||| ||| | ||| || ||||| | | || || ||||| || || Sbjct 2557206 GTAGAAGCA-CCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATT 2557264 Query 138438 GTAGTCGCTCATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTT 138496 |||||| | || | || | || || | ||||||||| | | |||| | | |||| Sbjct 2557265 GTAGTCAGAAAGGGTTCTGCCA-TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTT 2557323 Query 138497 GGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTC 138554 |||| || || |||||||||||||| ||| | || | ||| |||| || | |||||| Sbjct 2557324 GGTCAGGTGGAATACCTTCTTTGTC-TTGAATCTTGGATTTGACATTG-TCAATGGTGTC 2557381 Query 138555 GGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606 || || || || || | || | ||||||||||||| |||||| || ||| Sbjct 2557382 GGAAGATTCGACTTCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAACGAAA 2557433 >seq3 Length=3000806 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || || | | | || |||||||| ||||||||||| | Sbjct 835446 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 835505 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | || || | ||||||||| | | |||| | | ||||| || || || Sbjct 835506 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGA 835565 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| ||| || ||| | |||| || | ||||||| || || || Sbjct 835566 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTG-TCAATAGTGTCGGAGGATTCGAC 835624 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| || | ||||| || ||||| ||||| Sbjct 835625 TTCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCAT 835672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262356577040