Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017-
01-05] 7 sequences; 19,567,216 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq4 91.5 1e-13
seq3 89.7 5e-13
>seq4
Length=2649207
Score = 91.5 bits (100), Expect = 1e-13
Identities = 164/232 (71%), Gaps = 7/232 (3%)
Strand=Plus/Plus
Query 138378 GTAGCCGCAGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTT 138437
|||| ||| || |||| ||| | ||| || ||||| | | || || ||||| || ||
Sbjct 2557206 GTAGAAGCA-CCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATT 2557264
Query 138438 GTAGTCGCTCATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTT 138496
|||||| | || | || | || || | ||||||||| | | |||| | | ||||
Sbjct 2557265 GTAGTCAGAAAGGGTTCTGCCA-TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTT 2557323
Query 138497 GGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTC 138554
|||| || || |||||||||||||| ||| | || | ||| |||| || | ||||||
Sbjct 2557324 GGTCAGGTGGAATACCTTCTTTGTC-TTGAATCTTGGATTTGACATTG-TCAATGGTGTC 2557381
Query 138555 GGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606
|| || || || || | || | ||||||||||||| |||||| || |||
Sbjct 2557382 GGAAGATTCGACTTCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAACGAAA 2557433
>seq3
Length=3000806
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || || | | | || |||||||| ||||||||||| |
Sbjct 835446 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 835505
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | || || | ||||||||| | | |||| | | ||||| || || ||
Sbjct 835506 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGA 835565
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|||||||||||||| ||| || ||| | |||| || | ||||||| || || ||
Sbjct 835566 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTG-TCAATAGTGTCGGAGGATTCGAC 835624
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || ||||| || | ||||| || ||||| |||||
Sbjct 835625 TTCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCAT 835672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262356577040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |