Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017-
01-05] 7 sequences; 19,567,216 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq4 143 2e-29
seq1 140 2e-28
seq3 127 1e-24
>seq4
Length=2649207
Score = 143 bits (158), Expect = 2e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || || ||||| | ||||| |||||||| || ||||| ||
Sbjct 2557215 CCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAA 2557274
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| |||| | ||||| |||||||| ||||| | ||||| | |||||||| ||||
Sbjct 2557275 AGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 2557334
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||| ||||| ||| ||| ||| ||| | || || || ||| | ||| ||
Sbjct 2557335 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACT 2557394
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15168
|| ||||||||||||||||| |||| |||||| || |||
Sbjct 2557395 TCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAACGAAA 2557433
>seq1
Length=4889271
Score = 140 bits (154), Expect = 2e-28
Identities = 170/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| ||||| ||||| | ||||| |||||||| |||||||| || |
Sbjct 2093347 CCACCTCTCAATCTCAAAACCAAATGCAATGTAGATTCTTTTTGAATGTTGTAGTCA--G 2093404
Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| || |||| | ||||| ||||| || ||||| | ||||| | |||||||| ||
Sbjct 2093405 ACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTG 2093464
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
|||| ||||||||||| ||| ||| || ||| | || ||||| || | ||| |
Sbjct 2093465 GAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 2093524
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| || || || ||||||||||| || | || || ||||| |||||||||
Sbjct 2093525 CTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCATA 2093574
Score = 134 bits (148), Expect = 1e-26
Identities = 169/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| ||||| || || | ||||| |||||||| |||||||| || |
Sbjct 2093575 CCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCA--G 2093632
Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| || |||| | ||||| ||||| || ||||| | ||||| | |||||||| ||
Sbjct 2093633 ACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTG 2093692
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
|||| ||||||||||| ||| ||| || ||| | || ||||| || | ||| |
Sbjct 2093693 GAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 2093752
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| || || || ||||||||||| || | || || ||||| |||||||||
Sbjct 2093753 CTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCATA 2093802
Score = 132 bits (146), Expect = 3e-26
Identities = 168/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| ||||| || || | ||||| |||||||| |||||||| || |
Sbjct 2093803 CCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCA--G 2093860
Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| || |||| | ||||| ||||| || ||||| | ||||| | |||||||| ||
Sbjct 2093861 ACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTG 2093920
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
|||| ||||||||||| ||| ||| || ||| | || ||||| || | ||| |
Sbjct 2093921 GAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 2093980
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
| || || || ||||||||||| || | || || || |||||||||||
Sbjct 2093981 CTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 2094029
>seq3
Length=3000806
Score = 127 bits (140), Expect = 1e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || || || || | ||| || || ||||| |||||||| ||
Sbjct 835446 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 835505
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| | ||||| |||||||| ||||| | ||||| | ||||| || ||||
Sbjct 835506 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGA 835565
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||| ||||| || ||| ||| ||| | || ||||| ||| ||| ||
Sbjct 835566 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACT 835625
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|| | ||||||||| ||||| || | ||||| || ||||||||||| ||
Sbjct 835626 TCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCATCTT 835675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357391969509995
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |