Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq4 134 1e-26 seq3 129 5e-25 seq1 104 2e-17 >seq4 Length=2649207 Score = 134 bits (148), Expect = 1e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | ||||| || ||||| ||||||||||| || || | |||| | | Sbjct 2557227 CTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAAAGGGTTCTGCCA 2557286 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||||||||| || || | ||||||| ||| ||||| || ||||| |||||||| Sbjct 2557287 TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTG 2557346 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || ||||| || | |||||||||||| |||||||| | |||| Sbjct 2557347 TCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATG 2557406 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAA 45332 ||||| || || | |||||| || ||| Sbjct 2557407 GTTTTACCAGTCAAAGTTTTAACGAAA 2557433 >seq3 Length=3000806 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | |||| || |||||||||||||| || || || | ||| || | Sbjct 835458 CTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCA 835517 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||||||||| || || | ||||||| ||| || || || ||||| |||||||| Sbjct 835518 TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTG 835577 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || ||||| || | |||||||| || |||||||| || |||| Sbjct 835578 TCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACTTCAAGGGTAATG 835637 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || |||| ||||| || |||||||||||| Sbjct 835638 GTCTTACCCGTTAAGGTTTTAACGAAAATTTGCATC 835673 >seq1 Length=4889271 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | |||| || ||||| ||||| || || || || | |||| | | Sbjct 2093815 CTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCA 2093874 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| || Sbjct 2093875 TCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTG 2093934 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || |||| || | ||||| ||||| || ||||| | ||| | Sbjct 2093935 TCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATG 2093994 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || |||| || || || ||||||||||| Sbjct 2093995 GTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 2094029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003160449720