Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq3 100 7e-16 seq1 91.5 3e-13 >seq3 Length=3000806 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| | || || |||||||||| ||||||||||| |||||| || || Sbjct 835457 TCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 835516 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| || || || || ||||| | | || || || || ||| |||||| Sbjct 835517 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTT 835576 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||| || || || | ||||| | | ||| || || | || || Sbjct 835577 GTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACTTCAAGGGTAAT 835636 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| | ||||| || |||||||| Sbjct 835637 GGTCTTACCCGTTAAGGTTTTAACGAAAATTTG 835669 >seq1 Length=4889271 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | ||| | || || || ||||| | ||||||||||| ||| || || || Sbjct 2093586 TCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCC 2093645 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| ||||| || || || || | | || ||||| || ||| ||||| Sbjct 2093646 ATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTT 2093705 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || |||||||| ||| || || | ||||| | | ||| || ||||| ||||| Sbjct 2093706 GTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 2093765 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || | || || ||||| ||||| Sbjct 2093766 GGTTTTACCAGTTAAGGTCTTGACAAAGATTTG 2093798 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | ||| | || || || ||||| | ||||||||||| ||| || || || Sbjct 2093814 TCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCC 2093873 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| ||||| || || || || | | || ||||| || ||| ||||| Sbjct 2093874 ATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTT 2093933 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || |||||||| ||| || || | ||||| | | ||| || ||||| ||||| Sbjct 2093934 GTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 2093993 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || | || || || |||||||| Sbjct 2093994 GGTTTTACCAGTTAAGGTCTTGACGAAAATTTG 2094026 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || || || ||||| | ||||||||||| ||| || || |||||||||| ||||| || Sbjct 2093377 GTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATCTTCCAATTGCTTACCA 2093436 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 || || || | | || ||||| || ||| ||||| || |||||||| ||| Sbjct 2093437 GCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 2093496 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 || || | ||||| | | ||| || ||||| ||||| || ||||| || | || Sbjct 2093497 ACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTACCAGTTAAGGTC 2093556 Query 199613 TTCACAAAAATTTG 199626 || ||||| ||||| Sbjct 2093557 TTGACAAAGATTTG 2093570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921494265469