Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 seq3 95.1 1e-14 >seq1 Length=4889271 Score = 118 bits (130), Expect = 1e-21 Identities = 400/617 (65%), Gaps = 17/617 (3%) Strand=Plus/Plus Query 132875 CCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGA 132934 |||||||| ||| ||| || ||||| || ||| | || || || | |||| | Sbjct 3873468 CCAAATGCGAATACAACAAACAGGCAAAATCAGTATGAAGACCTTCATCGCGACAAATCA 3873527 Query 132935 GTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGG 132994 || ||| |||||| | |||||||| || || | ||| |||||||||||||| | | Sbjct 3873528 ACTCATTGGAGAAAGTAAGACCGGGCATAAGACCTCTTTTCTTGAGCCAAAATATCGAAG 3873587 Query 132995 CGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGA 133054 ||||| || ||||| || | || || ||||| || || || || | | || | | Sbjct 3873588 CGAAAGAACCGGAAAAAAATATACCTTCAACGGCAGCAAATGCTACTAATCTTTCAGCAA 3873647 Query 133055 ACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACG 133114 | || |||| | ||||| | |||||||| || || |||||||| | ||| | Sbjct 3873648 ATAAAGCGTCTTCATCTTCAATCCATCTAAGCGCCCAGTCTGCTTTTTCTTTAATGCATG 3873707 Query 133115 GCATCGTTTCGATGGCGTTCAACAAACGGAGTT---TCTCTTCCGAGGAAC--GCACGTA 133169 | || || || || || || || ||| | || || ||| |||| | | | || Sbjct 3873708 GAATTGTATCAATTGCATTAAATAAA---AATTCGGCCTGTTC--AGGATCCAGAATATA 3873762 Query 133170 GGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCC 133229 || || || | || || | || || || || |||||||| |||||||| || Sbjct 3873763 AGTATCTATCAACAGAGAGTATGTCTCTGAATGAACATTCTCCATCATTATTTGAAAACC 3873822 Query 133230 GTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTC 133289 |||||||| || ||| | ||| |||| || |||| || || ||||| || Sbjct 3873823 ATAAAAGCATTTGGCTTCGGGAATCTGTACTTGGGTAGAGAAATTCTGTACAAGATTCTC 3873882 Query 133290 GTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG--ATGAAATGGCGC 133347 || |||||||| || ||||| ||||| || ||||| || | |||||| | Sbjct 3873883 ATTAACGATGCCATCCGATGCGGCAAAAAATGCTAGCAC--TCTGGAAATGAAAAACTGT 3873940 Query 133348 TCGTTGTCGTTCAA---GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404 || ||| ||||| | ||| || || ||||| || || | |||||| Sbjct 3873941 TCATTGCTATTCAACTTATAGTTCCAATCATGCAAATCCTTACCAAGATCAATTTCCTCG 3874000 Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATG 133464 ||||||| || || || || |||||||||||||| ||| || || || | |||| Sbjct 3874001 GCGGTCCAGAAAGAAGCTTCTGCTTTTTTGTACATTTGCCATATTTCATGGTACTTTATG 3874060 Query 133465 GGAAAAATCACAAACCG 133481 ||||| | ||||| || Sbjct 3874061 GGAAATAATACAAAGCG 3874077 >seq3 Length=3000806 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || |||||||| ||||| ||||| | ||||| || ||||| ||| | || ||||| || Sbjct 835675 AAGATGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATCC 835616 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||||| | | | | ||| || |||| |||||||| || ||||| | || Sbjct 835615 TCCGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTGAT 835556 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| | | || | || || ||||| |||| || | | || | |||||| Sbjct 835555 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 835496 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||||| | || |||| ||||| || | |||||||| || Sbjct 835495 AACATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 835446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172756234880