Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq4 172 1e-37 seq3 158 3e-33 seq1 158 3e-33 >seq4 Length=2649207 Score = 172 bits (190), Expect = 1e-37 Identities = 166/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | || | ||| || |||||||| |||||||| || | ||| || Sbjct 2557220 TCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAAAGGGT 2557279 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | || ||||| || ||||| | || ||||||||| || ||||| || Sbjct 2557280 TCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACC 2557339 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||||||||| || ||||| || ||||||||||| ||| ||| ||||| | Sbjct 2557340 TTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAA 2557399 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 ||||| || || || ||||||||||| ||||| Sbjct 2557400 GGTAATGGTTTTACCAGTCAAAGTTTTAACGAA 2557432 >seq3 Length=3000806 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||| | ||||| || ||||| || ||||| || | | ||| Sbjct 835451 TCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGT 835510 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | || ||||| || ||||| | || |||||| || || ||||| || Sbjct 835511 TCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACC 835570 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||||||||| || || ||||| || ||||| ||||| || ||| |||||||| Sbjct 835571 TTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACTTCAAG 835630 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || || || ||||| ||||| | |||||| Sbjct 835631 GGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCAT 835672 >seq1 Length=4889271 Score = 158 bits (174), Expect = 3e-33 Identities = 171/224 (76%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAG 194977 ||| | ||||||||| | ||| | || || ||||||||||| ||||| || | |||| | Sbjct 2093808 TCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAG-G 2093866 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| | |||||||| || || || | || |||||||||||| ||||| | Sbjct 2093867 TTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATAC 2093926 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| ||||||||||| || |||||| || ||||| ||||| ||| ||| ||||| | Sbjct 2093927 CTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCA 2093986 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || | || || || || || || || ||||| | ||||||| Sbjct 2093987 AAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATT 2094030 Score = 152 bits (168), Expect = 1e-31 Identities = 169/223 (76%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAG 194977 ||| | ||||||||| | ||| | || || ||||||||||| ||||| || | |||| | Sbjct 2093580 TCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAG-G 2093638 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| | |||||||| || || || | || |||||||||||| ||||| | Sbjct 2093639 TTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATAC 2093698 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| ||||||||||| || |||||| || ||||| ||||| ||| ||| ||||| | Sbjct 2093699 CTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCA 2093758 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || || || || || || || | |||||| Sbjct 2093759 AAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093801 Score = 147 bits (162), Expect = 5e-30 Identities = 168/223 (75%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAG 194977 ||| | ||||||||| | || | || || ||||||||||| ||||| || | |||| | Sbjct 2093352 TCTCAATCTCAAAACCAAATGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAG-G 2093410 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| | |||||||| || || || | || |||||||||||| ||||| | Sbjct 2093411 TTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATAC 2093470 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| ||||||||||| || |||||| || ||||| ||||| ||| ||| ||||| | Sbjct 2093471 CTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCA 2093530 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || || || || || || || | |||||| Sbjct 2093531 AAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481500493369