Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1 109 4e-19 >seq1 Length=4889271 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| |||||||||||||| | ||| |||||| |||||||| ||||| || Sbjct 2093575 CCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGAC 2093634 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | ||| |||| |||| || || || ||||| || | || ||| |||||| | || Sbjct 2093635 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2093694 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || |||||||| |||||| ||||| | || | ||| | ||||| Sbjct 2093695 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 2093754 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || |||||||| || || | ||||| |||||||| |||||| Sbjct 2093755 TCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCATA 2093802 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| ||||||||||| || | ||| |||||| |||||||| ||||| || Sbjct 2093347 CCACCTCTCAATCTCAAAACCAAATGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGAC 2093406 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | ||| |||| |||| || || || ||||| || | || ||| |||||| | || Sbjct 2093407 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2093466 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || |||||||| |||||| ||||| | || | ||| | ||||| Sbjct 2093467 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 2093526 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || |||||||| || || | ||||| |||||||| |||||| Sbjct 2093527 TCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCATA 2093574 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| |||||||||||||| | ||| |||||| |||||||| ||||| || Sbjct 2093803 CCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGAC 2093862 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | ||| |||| |||| || || || ||||| || | || ||| |||||| | || Sbjct 2093863 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2093922 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || |||||||| |||||| ||||| | || | ||| | ||||| Sbjct 2093923 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 2093982 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | || |||||||| || || | ||||| || || || ||||| Sbjct 2093983 TCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 2094029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633572304696