Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 1e-15 seq1 93.3 6e-14 >seq3 Length=3000806 Score = 98.7 bits (108), Expect = 1e-15 Identities = 174/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 126945 ATTTTTATAGGTCCAACATACTATCATCGTCTTAAACATATGGTTAAAGATAAAATGCAT 127004 || ||| | || |||| || ||||| | ||||||||||| ||||| |||||| Sbjct 2161544 ATCTTTTTCGGACCAATTTATTATCAAAAATTAAAACATATGGTGCTTGATAAGATGCAT 2161485 Query 127005 GCTAGAAGTCATGGTCAAGTAACAACATTACATCGTCAACCAAACTGTGGTCGTTCCCAA 127064 |||||| | |||| | || ||| | | ||||||| | |||||||| | Sbjct 2161484 GCTAGAGCTAGAGGTCCGAGAGCAGTGTTAACTAGACAACCAACCGAAGGTCGTTCAAGA 2161425 Query 127065 GGTGGTGGATTAAGATTTGGAGAAATGGAAAAAGATTGTATTTTGGTTCATGGAGCCACA 127124 | ||||||||||||||| || || ||||||| ||| ||| | | | |||| || | Sbjct 2161424 GATGGTGGATTAAGATTGGGGGAGATGGAAAGAGACTGTGTAATTGCCTATGGGGCATCG 2161365 Query 127125 CAATTTTTAAATGAAAGAATGTTTTTATGTTCAGATCCTTTTCAAATTGATGTGTGTACA 127184 || || ||| ||||||| || | || |||| ||| ||||| | | || || |||| Sbjct 2161364 CAGTTGTTACTTGAAAGATTGATGTTGAGTTCCGATGCTTTTGATGTCGACGTTTGTAAT 2161305 Query 127185 AATTGTGGAATGAT 127198 |||||||| |||| Sbjct 2161304 AATTGTGGGTTGAT 2161291 >seq1 Length=4889271 Score = 93.3 bits (102), Expect = 6e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 104989 AGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATAT 105048 |||||| ||| | ||||| | ||||||||||||||||||||| ||| ||| |||||| Sbjct 1781788 AGAAGGCGATCTTGGACCTGTGTATGGATTTCAATGGAGACATTTTGGTGCTAAATATAA 1781729 Query 105049 CGACTGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTAT 105102 ||||||||||| ||||| | ||||| || | || ||| || |||||||| Sbjct 1781728 AGACTGTGATACTGACTACTCGGGCCAGGGAGTTGATCAACTAGCCCAAGTTAT 1781675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658403142389720