Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1 125 1e-23 >seq1 Length=4889271 Score = 125 bits (138), Expect = 1e-23 Identities = 545/852 (64%), Gaps = 20/852 (2%) Strand=Plus/Minus Query 47852 ACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAG 47911 ||||| || ||||||||||| ||||| || | || ||||| || |||||||| || Sbjct 4013317 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAATGAGATATTTTCCATGAAATCAAAT 4013258 Query 47912 GGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGCAGGTGATCCGCGA 47969 || ||| ||| |||||| | ||| | |||| ||| || || || | Sbjct 4013257 GGATTGTTAACGTTGTACACCTTCTTGTTA--CCCAATGACACCAACAATCTGTCAGCAA 4013200 Query 47970 CGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAG 48029 || |||| | |||| |||| | ||| ||||| || | | || || ||||| | Sbjct 4013199 CGAACTCTACATATTGGCACATTAATGTGCAATTCATACCCAACAATGAAACTGGCAAGG 4013140 Query 48030 CCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGG 48089 | | |||| | |||| || || || | || ||||| | ||||| || ||| Sbjct 4013139 CATCAGTGAAATACTCTTTTTCAATATCAACTGCTTCAGTGATAATCTTCTCAACAATT- 4013081 Query 48090 ACTCTGAGGGT---TTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGT 48146 |||| ||| ||||| || || || | | | || ||||||||||| ||| Sbjct 4013080 --TCTGCAGGTGGCTTGTTTTCCAAATG---GGAAAACAACAAACAGGCAAAGTCTGTGT 4013026 Query 48147 GCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCC 48206 |||| ||||| || | | || || |||||||||| | || ||||| | |||| Sbjct 4013025 GCAAACCTTCATCTCTGGAAATAAGTTCGTTGGAGAAAGTCAACCCTGGCATCAAACCCC 4012966 Query 48207 TCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCG 48266 ||| ||| | |||||| || | || ||||| ||||||||||| || || || || || | Sbjct 4012965 TCTTTTTCAACCAGAAGATGGAAGCAAAAGAACCAGAGAAGAAAATACCTTCAACAGCAG 4012906 Query 48267 CGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCC 48326 | || || | || || || || |||| | | || |||||| | |||| Sbjct 4012905 CAAAGGCAACCAATCTTTCACCAAATAAAGCCTCATCATCGTTGATCCATCTCAAAGCCC 4012846 Query 48327 AGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACT 48386 |||| || || | ||| || ||||| || || || ||||| ||| | | | | Sbjct 4012845 AGTCGGCTTTTTGCTTTATACATGGGATAGTTTCAATGGCATTGAATAAAAATTCAGATT 4012786 Query 48387 CACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCT 48446 | || |||| | || ||| | ||| | ||| | |||||||| | ||| | Sbjct 4012785 CTTTTGGGTCCTTGATGTAAGTATCAATTAGCAAAGAGTAAGTTTCAGAGTGAATATTTT 4012726 Query 48447 CTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC-AAACACCTGCACTTCTGTGGAG 48505 | || || ||||| || || ||| |||| || ||| |||||||| | ||| Sbjct 4012725 CCATCATAATTTGGAAACCATAAAAGAATTTGGCTTCTGGACA-TTGCACTTCGGCAGAG 4012667 Query 48506 AATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACA 48565 || | || | || || |||||||| || ||||| |||||||||||| || | || Sbjct 4012666 AAGTTTTCAACCAAGTTTTCATTGACAATACCATCACTAGCAGCAAAGAAAGCCAACAC- 4012608 Query 48566 TGTTTA-AGGAAATGGCGCTCGTTGTGGGTGA---GAGCATTCCAGCCCTGTACGTCTTT 48621 | | | ||||||| | |||||| | | |||||||| | || | ||||| Sbjct 4012607 TCTAGAGAGGAAATATCTTTCGTTGGCATTCAACTTGTCATTCCAGTCATGCATATCTTT 4012548 Query 48622 GCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCA 48681 | || ||| | ||||| |||||||||| || || || || |||||||| ||| Sbjct 4012547 ACTCAAGTCGATCTCTTCAGCAGTCCAGAATGAAGCTTCAGCCTTCTTGTACATTTGCCA 4012488 Query 48682 TATGTCCGGATA 48693 ||| || |||| Sbjct 4012487 TATTTCATGATA 4012476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532718490880