Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1 168 1e-36 seq3 159 6e-34 seq4 147 4e-30 >seq1 Length=4889271 Score = 168 bits (186), Expect = 1e-36 Identities = 179/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 ||||| |||||||||||||| | |||| ||||||||||| ||||| ||| || Sbjct 2093338 ATTTAGCAACCACCTCTCAATCTCAAAACCAAATGCAATGTAGATTCTTTTTGAATGTTG 2093397 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || || ||||| ||| || ||||| || || |||||||| ||||| ||||| Sbjct 2093398 TAGTCAGACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGG 2093457 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || ||||| || ||||| || |||| || | ||| |||||| || ||| Sbjct 2093458 TCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAA 2093517 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||||||| | ||| || |||||||| |||| || || ||||| |||||||| Sbjct 2093518 GATTCAACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093573 Score = 168 bits (186), Expect = 1e-36 Identities = 179/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||||||||||| | |||| |||||||||| ||||| ||| || Sbjct 2093566 ATTTGCATACCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTG 2093625 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || || ||||| ||| || ||||| || || |||||||| ||||| ||||| Sbjct 2093626 TAGTCAGACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGG 2093685 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || ||||| || ||||| || |||| || | ||| |||||| || ||| Sbjct 2093686 TCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAA 2093745 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||||||| | ||| || |||||||| |||| || || ||||| |||||||| Sbjct 2093746 GATTCAACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093801 Score = 167 bits (184), Expect = 4e-36 Identities = 179/237 (76%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||||||||||| | |||| |||||||||| ||||| ||| || Sbjct 2093794 ATTTGCATACCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTG 2093853 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || || ||||| ||| || ||||| || || |||||||| ||||| ||||| Sbjct 2093854 TAGTCAGACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGG 2093913 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || ||||| || ||||| || |||| || | ||| |||||| || ||| Sbjct 2093914 TCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAA 2093973 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || |||||||| | ||| || |||||||| |||| || || || || ||||||||| Sbjct 2093974 GATTCAACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATT 2094030 >seq3 Length=3000806 Score = 159 bits (176), Expect = 6e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||||||||||| | |||| ||||| || | || || || || ||||| || Sbjct 835445 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGA 835504 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 || |||||| ||| || |||||||| || ||||| || ||||| ||||||||||| || Sbjct 835505 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGG 835564 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || |||||||| ||||| || |||| ||| | ||| |||||| ||||| || || || Sbjct 835565 AATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGAC 835624 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||| || || || || ||||| |||| ||||| || || |||||||| || Sbjct 835625 TTCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCATCTT 835675 >seq4 Length=2649207 Score = 147 bits (162), Expect = 4e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||||||||||| | |||| |||||| |||| ||||| ||||| ||||| || Sbjct 2557214 ACCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGA 2557273 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | ||||| ||| || |||||||| || ||||| || ||||| ||||| ||||| || Sbjct 2557274 AAGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 2557333 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || |||||||| ||||| || |||| ||| | ||| ||| || |||||||| || || Sbjct 2557334 AATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGAC 2557393 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351 ||| | || || |||||||| || | ||||| || || Sbjct 2557394 TTCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAACGAA 2557432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899654321280240