Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1 179 7e-40 seq4 167 5e-36 seq3 165 2e-35 >seq1 Length=4889271 Score = 179 bits (198), Expect = 7e-40 Identities = 478/733 (65%), Gaps = 16/733 (2%) Strand=Plus/Plus Query 49647 AATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAAT 49706 || ||||| || || ||||||||||||||||| |||| |||| | ||||| ||||| Sbjct 4563309 AACAATCTGTCAGCAACAAATTCAACATATTGGCACATCAATTTAGCGTTCATGCCCAAA 4563368 Query 49707 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatt 49766 | || ||| || ||||| || |||||||||| || ||||| | |||| Sbjct 4563369 AGAGAAACTGGCAAAGCATCGGTAAAGTATTCTTTTTCAATAGTGACAGCCTCGGTAATA 4563428 Query 49767 atcataattatattattttttgataatttatatttaatatgattcgcatatattaaACAT 49826 ||| | || | |||| ||||| | | ||| | | | | | | | || || Sbjct 4563429 ATCTT--TTCAACAATTTCTTGATTTGGTTTGTTTTGCAAGTGT-GAAAACAACAAGCAA 4563485 Query 49827 GCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCT 49886 || || || ||||| ||||| || || || | || ||||||||| || ||||| ||| Sbjct 4563486 GCGAAGTCGGTATGCAAACCTTCATCTCTGCAAATCAATTCATTAGAGAAGGTTAAACCT 4563545 Query 49887 GGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATA 49946 ||||| | ||||||||||| | |||||| || || |||||| || ||| ||||| ||| Sbjct 4563546 GGCATCATACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAAATA 4563605 Query 49947 CCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATATC 50006 || || ||| ||||| || | | |||| | ||||||| || ||||| ||| Sbjct 4563606 CCTTCAACAGCAGCAAAGGCAACCAATCTTTCGCCAAACAAAGCTTGGTCATCATTGATC 4563665 Query 50007 CAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTA--- 50063 || | | ||||| || |||||||| || ||| | || ||| |||| ||||| ||| Sbjct 4563666 CATCTCAATGCCCAGTCAGCTTTTTTCTTAATACATGGGATAGTTTCAATAGCATTAAAC 4563725 Query 50064 AATAATTC--AtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACA 50121 || ||||| ||| |||| || || |||||||| Sbjct 4563726 AAGAATTCAGATTCTTTT-----GGATCCTTAATATAAGTATCAATCAACAAAGAATAAG 4563780 Query 50122 TTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAAT 50181 |||||||||||| |||||| ||||| || || || | | ||||||| | Sbjct 4563781 TTTCAGAATGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGGAC 4563840 Query 50182 ACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTG 50241 | |||||||||| | |||| |||||| || || || || ||||| ||| || | Sbjct 4563841 ATTGAACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACGATACCGTCACTAGCAG 4563900 Query 50242 CGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAA---ATTTTCCC 50298 | |||||||| || || ||| |||| | |||||||| | || || || | || Sbjct 4563901 CAAAGAATGCCAAGACTCTGGAAATGAAATATCTTTCATTAGCATTCAATCTGTTGTTCC 4563960 Query 50299 AAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATT 50358 | | | ||| || || || | |||||| |||||||| || ||| | | | Sbjct 4563961 AGTCGTGCAAATCTTTACTCAAGTCAATTTCTTCAGCAGTCCAAAAAGAGGCTTCAGCCT 4564020 Query 50359 TTTTATACATTTG 50371 | || |||||||| Sbjct 4564021 TCTTGTACATTTG 4564033 Score = 167 bits (184), Expect = 5e-36 Identities = 552/857 (64%), Gaps = 20/857 (2%) Strand=Plus/Plus Query 49592 CATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATAT-AATA 49650 |||||||||||||||||| | ||| || || ||| | || | | | | || |||| Sbjct 3873259 CATAAAATCAAATGGATTAGTAACATTGTAG-ATCTTTTTTCTGCCCAAAGAAATCAATA 3873317 Query 49651 ATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAATT 49710 ||||||| || ||||| ||||| || || ||| ||| | ||||| || | || Sbjct 3873318 ATCTATCAGCCACAAACTCAACGTACTGATTCATCAATGAAGCGTTCATTCCAAGCAAAG 3873377 Query 49711 TAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattatca 49770 || | |||||| || |||| | | ||||| ||||| || || | | | ||||| Sbjct 3873378 AAACAGATAATGCTTCGTCAAAATAACGCTTTTCAATTTCAACCGCCTCTGTTATTATTT 3873437 Query 49771 taattatattattttttgataa--tttatatttaatatgattcgcatatattaaACATGC 49828 || | | ||||| | || | ||| | || | ||| || ||| | ||||| || Sbjct 3873438 TA--TCAACTATTTCTGCATCAGGTTTGTTTTCCAAATG---CGAATACAACAAACAGGC 3873492 Query 49829 AAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGG 49888 |||||||||||| | ||| || || | | | || || ||||| ||||| | || || Sbjct 3873493 AAAATCAGTATGAAGACCTTCATCGCGACAAATCAACTCATTGGAGAAAGTAAGACCGGG 3873552 Query 49889 CATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACC 49948 ||| | ||||| || || ||||||||||| || || ||| || ||||| |||||||| Sbjct 3873553 CATAAGACCTCTTTTCTTGAGCCAAAATATCGAAGCGAAAGAACCGGAAAAAAATATACC 3873612 Query 49949 CTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATATCCA 50008 || || |||||||||| || |||| | |||| | | |||||| ||||| Sbjct 3873613 TTCAACGGCAGCAAATGCTACTAATCTTTCAGCAAATAAAGCGTCTTCATCTTCAATCCA 3873672 Query 50009 ATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAAT-- 50066 | | ||||| |||||||||| ||| || | || || | || || || |||||| Sbjct 3873673 TCTAAGCGCCCAGTCTGCTTTTTCTTTAATGCATGGAATTGTATCAATTGCATTAAATAA 3873732 Query 50067 -AATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTTC 50125 ||||| | |||| || || | ||| || | || Sbjct 3873733 AAATTCGGCCTGTTCA---GGATCCAGAATATAAGTATCTATCAACAGAGAGTATGTCTC 3873789 Query 50126 AGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACTG 50185 ||||| ||| ||||| ||||||||| |||||| | | ||||| | | ||| Sbjct 3873790 TGAATGAACATTCTCCATCATTATTTGAAAACCATAAAAGCATTTGGCTTCGGGAATCTG 3873849 Query 50186 AACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAA 50245 |||| || | |||| | || | ||||||| || || ||||| ||||| || || Sbjct 3873850 TACTTGGGTAGAGAAATTCTGTACAAGATTCTCATTAACGATGCCATCCGATGCGGCAAA 3873909 Query 50246 GAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAATT----TTCCCAAG 50301 ||||||| || ||| ||| | |||||| || || || |||| | Sbjct 3873910 AAATGCTAGCACTCTGGAAATGAAAAACTGTTCATTGCTATTCAACTTATAGTTCCAATC 3873969 Query 50302 ATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTTTT 50361 || ||| ||| || | ||| | ||| || ||||| || || ||| | | ||||| Sbjct 3873970 ATGCAA-ATCCTTACCAAGATCAATTTCCTCGGCGGTCCAGAAAGAAGCTTCTGCTTTTT 3874028 Query 50362 TATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATCGTTTAGTAtttt 50421 | |||||||| |||| ||| | | |||||||||| |||| | || || | |||| Sbjct 3874029 TGTACATTTGCCATATTTCATGGTACTTTATGGGAAATAATACAAAGCGCTTTTTGTTTT 3874088 Query 50422 tttCTAATATCGGTTCT 50438 || | |||||| ||| Sbjct 3874089 CTTTGAGTATCGGCTCT 3874105 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || ||||| || |||| ||||| || || || ||||| Sbjct 2093346 ACCACCTCTCAATCTCAAAACCAAATGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGA 2093405 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||| |||| |||||||| ||||||||||| || ||||| ||||| || ||||| Sbjct 2093406 CAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGG 2093465 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || ||||| || ||||| || || || ||||| |||| || || ||||| || Sbjct 2093466 AATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 2093525 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||| | ||| ||||||||||||||||| || || | ||| || ||||| Sbjct 2093526 TTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093573 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | || || || || || |||| ||||| || || || ||| Sbjct 2093572 ATACCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCA 2093631 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || |||| |||| |||||||| ||||||||||| || ||||| ||||| || ||| Sbjct 2093632 GACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGT 2093691 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || || ||||| |||| || || ||||| Sbjct 2093692 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCA 2093751 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | ||| ||||||||||||||||| || || | ||| || ||||| Sbjct 2093752 ACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093801 Score = 141 bits (156), Expect = 2e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | || || || || || |||| ||||| || || || ||| Sbjct 2093800 ATACCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCA 2093859 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || |||| |||| |||||||| ||||||||||| || ||||| ||||| || ||| Sbjct 2093860 GACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGT 2093919 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || || ||||| |||| || || ||||| Sbjct 2093920 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCA 2093979 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| | ||| ||||||||||||||||| || || | || || |||||| Sbjct 2093980 ACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATT 2094030 >seq4 Length=2649207 Score = 167 bits (184), Expect = 5e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || ||||| ||||||| ||||| |||||| || ||||| Sbjct 2557214 ACCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGA 2557273 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | |||| |||| ||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct 2557274 AAGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 2557333 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || |||||||| ||||| || || ||| ||||| || | || || ||||| || Sbjct 2557334 AATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGAC 2557393 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 192523 ||| | ||||||||||||||||| || ||||||| Sbjct 2557394 TTCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAA 2557428 >seq3 Length=3000806 Score = 165 bits (182), Expect = 2e-35 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || || || || || | || || ||| || || ||||| Sbjct 835445 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGA 835504 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||| |||| ||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 835505 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGG 835564 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || |||||||| ||||| || || ||| ||||| |||| || || ||||| || Sbjct 835565 AATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGAC 835624 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||| || |||||||| ||||| ||||| ||||||| || || ||||| || Sbjct 835625 TTCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCATCTT 835675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479911704450