Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017-
01-05] 7 sequences; 19,567,216 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq1 188 1e-42
seq4 161 2e-34
seq3 156 8e-33
>seq1
Length=4889271
Score = 188 bits (208), Expect = 1e-42
Identities = 370/542 (68%), Gaps = 9/542 (2%)
Strand=Plus/Plus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
||||| || ||||| || |||| || || || || ||||| ||| | ||||| ||
Sbjct 3873197 TTTTGATAATCAGATACCCTTTTCTCAAAGAAATTAGTTTTCCCTGCCAATGAAATGTTT 3873256
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATAT-AA 38950
| |||||||||||||||||| | ||| || || ||| | || | | | | || ||
Sbjct 3873257 TCCATAAAATCAAATGGATTAGTAACATTGTAG-ATCTTTTTTCTGCCCAAAGAAATCAA 3873315
Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
||||||||| |||||||| ||||| || || ||| ||| | ||||| || | ||
Sbjct 3873316 TAATCTATCAGCCACAAACTCAACGTACTGATTCATCAATGAAGCGTTCATTCCAAGCAA 3873375
Query 39011 TTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattat 39070
|| | |||||| || |||| | | ||||| ||||| || || | | | |||||
Sbjct 3873376 AGAAACAGATAATGCTTCGTCAAAATAACGCTTTTCAATTTCAACCGCCTCTGTTATTAT 3873435
Query 39071 cataattatattattttttgataa--tttatatttaatatgattcgcatataGTAAACAT 39128
|| | | ||||| | || | ||| | || | ||| || ||| | |||||
Sbjct 3873436 TTTA--TCAACTATTTCTGCATCAGGTTTGTTTTCCAAATG---CGAATACAACAAACAG 3873490
Query 39129 GCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCT 39188
|||||||| ||||| | |||||| || | | | || || ||||| ||||| | ||
Sbjct 3873491 GCAAAATCAGTATGAAGACCTTCATCGCGACAAATCAACTCATTGGAGAAAGTAAGACCG 3873550
Query 39189 GGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATA 39248
||||| | ||||| || || ||||||||||| || || ||| || ||||| ||||||
Sbjct 3873551 GGCATAAGACCTCTTTTCTTGAGCCAAAATATCGAAGCGAAAGAACCGGAAAAAAATATA 3873610
Query 39249 CCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATC 39308
|| || || |||||||||| || |||| | |||| | | |||||| ||||
Sbjct 3873611 CCTTCAACGGCAGCAAATGCTACTAATCTTTCAGCAAATAAAGCGTCTTCATCTTCAATC 3873670
Query 39309 CAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAAT 39368
|| | | ||||| |||||||||| ||| || | || || | || || || ||||||
Sbjct 3873671 CATCTAAGCGCCCAGTCTGCTTTTTCTTTAATGCATGGAATTGTATCAATTGCATTAAAT 3873730
Query 39369 AA 39370
||
Sbjct 3873731 AA 3873732
Score = 188 bits (208), Expect = 1e-42
Identities = 370/542 (68%), Gaps = 9/542 (2%)
Strand=Plus/Plus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|||||||| || |||||| | ||||| || ||||| ||||| || | || || ||
Sbjct 4563192 TTTTGGTAGTCGGAAACTCTCTTTTCAAAGAAGTTAGTTTTACCGGCCAAAGAAATGTTT 4563251
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTT-TTCT--CCTATCAATACATAT 38948
| |||||| || ||||| || | ||| ||| || || | || ||| ||
Sbjct 4563252 TCCATAAAGTCGAATGGGTTGGTAACATTGTAAACCTTCTTGTTGCC---CAAAGCAACC 4563308
Query 38949 AATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAAT 39008
|| ||||| || || ||||||||||||||||| |||| |||| | ||||| |||||
Sbjct 4563309 AACAATCTGTCAGCAACAAATTCAACATATTGGCACATCAATTTAGCGTTCATGCCCAAA 4563368
Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatt 39068
| || ||| || ||||| || |||||||||| || ||||| | ||||
Sbjct 4563369 AGAGAAACTGGCAAAGCATCGGTAAAGTATTCTTTTTCAATAGTGACAGCCTCGGTAATA 4563428
Query 39069 atcataattatattattttttgataatttatatttaatatgattcgcatataGTAAACAT 39128
||| | || | |||| ||||| | | ||| | | | | | | | || ||
Sbjct 4563429 ATCTT--TTCAACAATTTCTTGATTTGGTTTGTTTTGCAAGTGT-GAAAACAACAAGCAA 4563485
Query 39129 GCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCT 39188
|| || || ||||| |||||||| || || | || ||||||||| || ||||| |||
Sbjct 4563486 GCGAAGTCGGTATGCAAACCTTCATCTCTGCAAATCAATTCATTAGAGAAGGTTAAACCT 4563545
Query 39189 GGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATA 39248
||||| | ||||||||||| | |||||| || || |||||| || ||| ||||| |||
Sbjct 4563546 GGCATCATACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAAATA 4563605
Query 39249 CCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATC 39308
|| || ||| ||||| || | | |||| | ||||||| || ||||| |||
Sbjct 4563606 CCTTCAACAGCAGCAAAGGCAACCAATCTTTCGCCAAACAAAGCTTGGTCATCATTGATC 4563665
Query 39309 CAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAAT 39368
|| | | ||||| || |||||||| || ||| | || ||| |||| ||||| |||||
Sbjct 4563666 CATCTCAATGCCCAGTCAGCTTTTTTCTTAATACATGGGATAGTTTCAATAGCATTAAAC 4563725
Query 39369 AA 39370
||
Sbjct 4563726 AA 4563727
Score = 156 bits (172), Expect = 8e-33
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || || || || |||| ||||| ||| || || ||
Sbjct 2093800 ATACCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCA 2093859
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | || |||||||| |||||||||||||| ||||| |||||||| |||
Sbjct 2093860 GACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGT 2093919
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || || || ||||| ||||| || || |||||
Sbjct 2093920 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCA 2093979
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | ||| ||||||||||||||||| || || | ||| || ||||||
Sbjct 2093980 ACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATT 2094030
Score = 150 bits (166), Expect = 3e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||||||||| | || || || ||||| || |||| ||||| ||| || || || ||
Sbjct 2093346 ACCACCTCTCAATCTCAAAACCAAATGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGA 2093405
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
|| | || | || |||||||| |||||||||||||| ||||| |||||||| |||||
Sbjct 2093406 CAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGG 2093465
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| ||||| || ||||| || || || ||||| ||||| || || ||||| ||
Sbjct 2093466 AATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 2093525
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||| | ||| ||||||||||||||||| || || | || || |||||
Sbjct 2093526 TTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093573
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || || || || |||| ||||| ||| || || ||
Sbjct 2093572 ATACCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCA 2093631
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | || |||||||| |||||||||||||| ||||| |||||||| |||
Sbjct 2093632 GACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGT 2093691
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || || || ||||| ||||| || || |||||
Sbjct 2093692 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCA 2093751
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | ||| ||||||||||||||||| || || | || || |||||
Sbjct 2093752 ACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093801
>seq4
Length=2649207
Score = 161 bits (178), Expect = 2e-34
Identities = 167/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||||||||| | || || || ||||| ||||||| ||||| ||||| || || ||
Sbjct 2557214 ACCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGA 2557273
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
| | || | || |||||||||||||||||||| || ||||| ||||||||||||||
Sbjct 2557274 AAGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 2557333
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| |||||||| ||||| || || ||| ||||| || || || || ||||| ||
Sbjct 2557334 AATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGAC 2557393
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060
||| | ||||||||||||||||| || ||||||| |||
Sbjct 2557394 TTCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAACGAA 2557432
>seq3
Length=3000806
Score = 156 bits (172), Expect = 8e-33
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||||||||| | || || || || || || || | || || || || || || ||
Sbjct 835445 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGA 835504
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
|||| || | || |||||||||||||||||||| || ||||| ||||| ||||||||
Sbjct 835505 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGG 835564
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| |||||||| ||||| || || ||| ||||| ||||| || || ||||| ||
Sbjct 835565 AATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGAC 835624
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||| || |||||||| ||||| ||||| ||||||| ||| || ||||| ||
Sbjct 835625 TTCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCATCTT 835675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135920800600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |