Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3 168 6e-37 seq1 134 1e-26 seq4 129 5e-25 >seq3 Length=3000806 Score = 168 bits (186), Expect = 6e-37 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || ||||||| |||| ||||| || ||||| || ||||| ||| || | Sbjct 835673 GATGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATCCTC 835614 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || ||| |||||||||||||||||||| || || || ||||| Sbjct 835613 CGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTGATCA 835554 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | ||||||||||| || ||||| |||| ||| |||| |||| || || || Sbjct 835553 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAA 835494 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 ||| ||||||||||| || | |||||||| ||| ||||| | || || || Sbjct 835493 CATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGGTGG 835443 >seq1 Length=4889271 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || |||| |||||||| || || | ||||| ||| | | Sbjct 2093801 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2093742 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| ||||| || || || || ||| Sbjct 2093741 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 2093682 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||| ||||| || || || |||| ||| |||| | |||| || || ||| Sbjct 2093681 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAAC 2093622 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| ||| | |||||||| ||| ||||| | || || Sbjct 2093621 ATTCAAAAAGAATCTACATTGCACTTGGTTTTGAGATTGAGAGGTGG 2093575 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || |||| |||||||| || || | ||||| ||| | | Sbjct 2093573 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2093514 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| ||||| || || || || ||| Sbjct 2093513 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 2093454 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||| ||||| || || || |||| ||| |||| | |||| || || ||| Sbjct 2093453 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAAC 2093394 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| ||| | || ||||| ||| ||||| | || || Sbjct 2093393 ATTCAAAAAGAATCTACATTGCATTTGGTTTTGAGATTGAGAGGTGG 2093347 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || |||| |||||||| || || | ||||| ||| | | Sbjct 2094029 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2093970 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| ||||| || || || || ||| Sbjct 2093969 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 2093910 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||| ||||| || || || |||| ||| |||| | |||| || || ||| Sbjct 2093909 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAAC 2093850 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| ||| | |||||||| ||| ||||| | || || Sbjct 2093849 ATTCAAAAAGAATCTACATTGCACTTGGTTTTGAGATTGAGAGGTGG 2093803 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 126046 GTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAttttttttATAAAGACAAAGGGT 126105 || ||||| | ||||| || ||| ||| || | || |||| | |||| || ||| Sbjct 3873618 GTTGAAGGTATATTTTTTTCCGGTTCTTTCGCTTCGATATTTTGGCTCAAGAAAAGAGGT 3873559 Query 126106 ATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTGACGAAGGACTCCATACG 126165 | ||||||||||| || ||| ||| |||||||||| ||| || ||||| || ||||| Sbjct 3873558 CTTATGCCCGGTCTTACTTTCTCCAATGAGTTGATTTGTCGCGATGAAGGTCTTCATACT 3873499 Query 126166 GACTTTGCATGTCTGT 126181 || ||||| ||| ||| Sbjct 3873498 GATTTTGCCTGTTTGT 3873483 >seq4 Length=2649207 Score = 129 bits (142), Expect = 5e-25 Identities = 157/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 24717 TTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAA 24776 ||||||| | || |||||||| ||||| | ||||| ||| | ||||||| | || | Sbjct 2557428 TTAAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCATTGACA 2557369 Query 24777 CGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCT 24836 || ||| ||||| |||||||||||||| || || || || |||||| | ||||||| Sbjct 2557368 ATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTGATCT 2557309 Query 24837 TTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAAT 24896 |||| || ||||| |||| ||| |||| | | || || || || || ||||| |||| Sbjct 2557308 TTGCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAAAAAGAAT 2557249 Query 24897 CGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | || | || ||||| ||| ||||| | || || Sbjct 2557248 CTACTTTGCATTTGGTCTTGAGATTGAGAGGTGG 2557215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897560633960