Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017-
01-05] 7 sequences; 19,567,216 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq3 143 4e-29
seq4 134 2e-26
seq1 127 3e-24
>seq3
Length=3000806
Score = 143 bits (158), Expect = 4e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | ||||| ||||| || || || ||||| |||| || ||| ||
Sbjct 835671 TGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATCCTCCG 835612
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| | ||||| ||| || || ||| |||||||| |||||||| |||||||
Sbjct 835611 ACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTGATCAAC 835552
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | || ||||| ||||||||||| || ||| |||||| || | || || || |
Sbjct 835551 AAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACA 835492
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258
| ||||| ||||| || | || || || || |||| ||||| |||
Sbjct 835491 TCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGGT 835445
>seq4
Length=2649207
Score = 134 bits (148), Expect = 2e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 146040 TTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATT 146099
||| | ||||| || || || ||||| ||||| | || || ||| | ||| || |||
Sbjct 2557432 TTCGTTAAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCATT 2557373
Query 146100 CAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTC 146159
| ||||| ||| || || ||| |||||||| |||||||| || ||||||||| |
Sbjct 2557372 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 2557313
Query 146160 ATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAA 146219
|| ||||| ||||||||||| || ||| ||||| | | || || ||||| ||||||
Sbjct 2557312 ATCTTTGCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAAAAA 2557253
Query 146220 GAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258
||||| ||| | ||||| || || |||| ||||| |||
Sbjct 2557252 GAATCTACTTTGCATTTGGTCTTGAGATTGAGAGGTGGT 2557214
>seq1
Length=4889271
Score = 127 bits (140), Expect = 3e-24
Identities = 169/235 (72%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | || || ||||| || ||||| || ||| | || || ||| | |
Sbjct 2093572 TGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCTG 2093513
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| | ||||| || || || ||| || ||||| |||||||| || ||||
Sbjct 2093512 ACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAAC 2093453
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | |||||||| ||||| ||||| || ||| ||||| || | || || || |
Sbjct 2093452 AAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAACA 2093393
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAAT 146266
| ||||||||||| || | ||||| || || |||| ||||| ||| |||||
Sbjct 2093392 TTCAAAAAGAATCTACATTGCATTTGGTTTTGAGATTGAGAGGTGGTTGCTAAAT 2093338
Score = 127 bits (140), Expect = 3e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | || || ||||| || ||||| || ||| | || || ||| | |
Sbjct 2094028 TGCAAATTTTCGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCTG 2093969
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| | ||||| || || || ||| || ||||| |||||||| || ||||
Sbjct 2093968 ACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAAC 2093909
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | |||||||| ||||| ||||| || ||| ||||| || | || || || |
Sbjct 2093908 AAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAACA 2093849
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||||||||| || | || || || || |||| ||||| ||||
Sbjct 2093848 TTCAAAAAGAATCTACATTGCACTTGGTTTTGAGATTGAGAGGTGGTA 2093801
Score = 123 bits (136), Expect = 4e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | || || ||||| || ||||| || ||| | || || ||| | |
Sbjct 2093800 TGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCTG 2093741
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| | ||||| || || || ||| || ||||| |||||||| || ||||
Sbjct 2093740 ACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAAC 2093681
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | |||||||| ||||| ||||| || ||| ||||| || | || || || |
Sbjct 2093680 AAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAACA 2093621
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||||||||| || | || || || || |||| ||||| ||||
Sbjct 2093620 TTCAAAAAGAATCTACATTGCACTTGGTTTTGAGATTGAGAGGTGGTA 2093573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786166331210440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |