Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017-
01-05] 7 sequences; 19,567,216 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq1 156 3e-33
seq3 154 1e-32
seq4 140 2e-28
>seq1
Length=4889271
Score = 156 bits (172), Expect = 3e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || |||||||| | || ||||||||||||||||| || || |
Sbjct 2093347 CCACCTCTCAATCTCAAAACCAAATGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGAC 2093406
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | ||| || | ||| || |||||| | ||||||||||| || || || |||
Sbjct 2093407 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2093466
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| ||| || | |||||| | || | |||||||||| ||| ||
Sbjct 2093467 ATACCTTCCTTGTCTTG-AATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 2093525
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| | ||| || ||||| ||||||||||| || ||||| || |||||
Sbjct 2093526 TTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093573
Score = 152 bits (168), Expect = 4e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || | || ||||||||||||||||| || || |
Sbjct 2093575 CCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGAC 2093634
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | ||| || | ||| || |||||| | ||||||||||| || || || |||
Sbjct 2093635 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2093694
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| ||| || | |||||| | || | |||||||||| ||| ||
Sbjct 2093695 ATACCTTCCTTGTCTTG-AATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 2093753
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| | ||| || ||||| ||||||||||| || ||||| || |||||
Sbjct 2093754 TTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093801
Score = 149 bits (164), Expect = 5e-31
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || | || ||||||||||||||||| || || |
Sbjct 2093803 CCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGAC 2093862
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | ||| || | ||| || |||||| | ||||||||||| || || || |||
Sbjct 2093863 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2093922
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| ||| || | |||||| | || | |||||||||| ||| ||
Sbjct 2093923 ATACCTTCCTTGTCTTG-AATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 2093981
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||| | ||| || ||||| ||||||||||| || || || || ||||||
Sbjct 2093982 TTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATT 2094030
>seq3
Length=3000806
Score = 154 bits (170), Expect = 1e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || | |||||||| ||||| ||||| || || |
Sbjct 835446 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 835505
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || | |||||| |||||| | ||||||||||| ||||| || |||
Sbjct 835506 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGA 835565
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| ||||||||||| | || ||||||| | || | |||||| || ||| |||
Sbjct 835566 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACT 835625
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
||||| || || || || || |||||||||||||| || || ||||| ||
Sbjct 835626 TCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCATCTT 835675
>seq4
Length=2649207
Score = 140 bits (154), Expect = 2e-28
Identities = 164/219 (75%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || |||||||| | || ||||||||||| || || || || | |
Sbjct 2557215 CCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAA 2557274
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | ||| || | |||||| |||||| | ||||||||||| || || || |||
Sbjct 2557275 AGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 2557334
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| ||||||||||| ||| || | ||||||| | || | ||||| ||| ||| ||
Sbjct 2557335 ATACCTTCTTTGTCTTG-AATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGAC 2557393
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
||| | || || ||||| ||||| || |||||||| ||
Sbjct 2557394 TTCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAACGAA 2557432
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385219167135987
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |