Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 4e-15 seq3 87.8 2e-12 >seq1 Length=4889271 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/190 (72%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 168615 GAATTTTTAGATTTATGTGGTTTTACCGAAAGAAAAGAAGGTGATTTAGGTCCAATTTAT 168674 |||| ||| |||| | ||| || || | | | |||||| ||| | || || | ||| Sbjct 1781823 GAATATTTGGATTCAATTGGGTTGACAAATAACAGAGAAGGCGATCTTGGACCTGTGTAT 1781764 Query 168675 GGATTTCAATGGAGACATGCAGGAGCTCAATATATTGACTGTGATACAGATTACACCGGA 168734 |||||||||||||||||| || ||| |||||| ||||||||||| || ||| | || Sbjct 1781763 GGATTTCAATGGAGACATTTTGGTGCTAAATATAAAGACTGTGATACTGACTACTCGGGC 1781704 Query 168735 CAAGGAGTAGACCAATTAAGTCAAACTATAAATACTTTACACAACAATCCGGAAAATAGA 168794 || ||||| || ||| || ||| ||| ||| || | | |||||| | ||||| Sbjct 1781703 CAGGGAGTTGATCAACTAGCCCAAGTTATCCATAAATTGAAAACCAATCCATATGATAGA 1781644 Query 168795 AGAAT-ATTA 168803 ||||| |||| Sbjct 1781643 AGAATCATTA 1781634 >seq3 Length=3000806 Score = 87.8 bits (96), Expect = 2e-12 Identities = 174/255 (68%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 193794 ATTTTTATAGGGCCAACTTATTATCATCGTCTTAAACATATGGTTAAGGATAAAATGCAT 193853 || ||| | || |||| ||||||||| | ||||||||||| ||||| |||||| Sbjct 2161544 ATCTTTTTCGGACCAATTTATTATCAAAAATTAAAACATATGGTGCTTGATAAGATGCAT 2161485 Query 193854 GCTAGAAGTCATGGACAAGTGACTACT-TTACATCGACAACCAAATTGTGGTCGTTCTCA 193912 |||||| | || | | || | | ||| | ||||||||| |||||||| Sbjct 2161484 GCTAGAGCTAGAGGTC-CGAGAGCAGTGTTAACTAGACAACCAACCGAAGGTCGTTCAAG 2161426 Query 193913 AGGTGGAGGTTTAAGATTTGGAGAAATGGAGAAAGACTGTATTTTAGTTCATGGTGCTAC 193972 || ||| || |||||||| || || ||||| | ||||||| | | | |||| || | Sbjct 2161425 AGATGGTGGATTAAGATTGGGGGAGATGGAAAGAGACTGTGTAATTGCCTATGGGGCATC 2161366 Query 193973 TCAATTCTTGAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGCAC 194032 || || || ||||||| || | ||| ||| ||| ||||| | ||||| ||||| | Sbjct 2161365 GCAGTTGTTACTTGAAAGATTGATGTTGAGTTCCGATGCTTTTGATGTCGACGTTTGTAA 2161306 Query 194033 AGAATGTGGTATGAT 194047 | ||||| |||| Sbjct 2161305 TAATTGTGGGTTGAT 2161291 Score = 82.4 bits (90), Expect = 1e-10 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 193482 CAAAAAGGAACTTGTGGTATGATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGT 193541 |||||||| ||| |||||| | |||| ||| ||||||||||| ||||| || ||| Sbjct 1496223 CAAAAAGGTACTATTGGTATCACTTATAGACATGAAGATATGCCGTTTACTGCAGAAGGG 1496282 Query 193542 ATGGTACCAGATATTATTATTAATCCAAATTGTATTCCATCCAGAATGAC 193591 |||| |||||| | |||||||||| || ||||||||| | ||||| Sbjct 1496283 GTGGTTCCAGATTTGGTTATTAATCCGCATGCTATTCCATCTCGTATGAC 1496332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635177544421960