Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017-
01-05] 7 sequences; 19,567,216 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 4e-15
seq3 87.8 2e-12
>seq1
Length=4889271
Score = 96.9 bits (106), Expect = 4e-15
Identities = 136/190 (72%), Gaps = 1/190 (1%)
Strand=Plus/Minus
Query 168615 GAATTTTTAGATTTATGTGGTTTTACCGAAAGAAAAGAAGGTGATTTAGGTCCAATTTAT 168674
|||| ||| |||| | ||| || || | | | |||||| ||| | || || | |||
Sbjct 1781823 GAATATTTGGATTCAATTGGGTTGACAAATAACAGAGAAGGCGATCTTGGACCTGTGTAT 1781764
Query 168675 GGATTTCAATGGAGACATGCAGGAGCTCAATATATTGACTGTGATACAGATTACACCGGA 168734
|||||||||||||||||| || ||| |||||| ||||||||||| || ||| | ||
Sbjct 1781763 GGATTTCAATGGAGACATTTTGGTGCTAAATATAAAGACTGTGATACTGACTACTCGGGC 1781704
Query 168735 CAAGGAGTAGACCAATTAAGTCAAACTATAAATACTTTACACAACAATCCGGAAAATAGA 168794
|| ||||| || ||| || ||| ||| ||| || | | |||||| | |||||
Sbjct 1781703 CAGGGAGTTGATCAACTAGCCCAAGTTATCCATAAATTGAAAACCAATCCATATGATAGA 1781644
Query 168795 AGAAT-ATTA 168803
||||| ||||
Sbjct 1781643 AGAATCATTA 1781634
>seq3
Length=3000806
Score = 87.8 bits (96), Expect = 2e-12
Identities = 174/255 (68%), Gaps = 2/255 (1%)
Strand=Plus/Minus
Query 193794 ATTTTTATAGGGCCAACTTATTATCATCGTCTTAAACATATGGTTAAGGATAAAATGCAT 193853
|| ||| | || |||| ||||||||| | ||||||||||| ||||| ||||||
Sbjct 2161544 ATCTTTTTCGGACCAATTTATTATCAAAAATTAAAACATATGGTGCTTGATAAGATGCAT 2161485
Query 193854 GCTAGAAGTCATGGACAAGTGACTACT-TTACATCGACAACCAAATTGTGGTCGTTCTCA 193912
|||||| | || | | || | | ||| | ||||||||| ||||||||
Sbjct 2161484 GCTAGAGCTAGAGGTC-CGAGAGCAGTGTTAACTAGACAACCAACCGAAGGTCGTTCAAG 2161426
Query 193913 AGGTGGAGGTTTAAGATTTGGAGAAATGGAGAAAGACTGTATTTTAGTTCATGGTGCTAC 193972
|| ||| || |||||||| || || ||||| | ||||||| | | | |||| || |
Sbjct 2161425 AGATGGTGGATTAAGATTGGGGGAGATGGAAAGAGACTGTGTAATTGCCTATGGGGCATC 2161366
Query 193973 TCAATTCTTGAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGCAC 194032
|| || || ||||||| || | ||| ||| ||| ||||| | ||||| ||||| |
Sbjct 2161365 GCAGTTGTTACTTGAAAGATTGATGTTGAGTTCCGATGCTTTTGATGTCGACGTTTGTAA 2161306
Query 194033 AGAATGTGGTATGAT 194047
| ||||| ||||
Sbjct 2161305 TAATTGTGGGTTGAT 2161291
Score = 82.4 bits (90), Expect = 1e-10
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 193482 CAAAAAGGAACTTGTGGTATGATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGT 193541
|||||||| ||| |||||| | |||| ||| ||||||||||| ||||| || |||
Sbjct 1496223 CAAAAAGGTACTATTGGTATCACTTATAGACATGAAGATATGCCGTTTACTGCAGAAGGG 1496282
Query 193542 ATGGTACCAGATATTATTATTAATCCAAATTGTATTCCATCCAGAATGAC 193591
|||| |||||| | |||||||||| || ||||||||| | |||||
Sbjct 1496283 GTGGTTCCAGATTTGGTTATTAATCCGCATGCTATTCCATCTCGTATGAC 1496332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635177544421960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |