Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 1e-15 seq1 98.7 1e-15 >seq3 Length=3000806 Score = 98.7 bits (108), Expect = 1e-15 Identities = 174/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 201921 ATTTTTATAGGCCCAACATACTATCATCGTCTTAAACATATGGTTAAGGATAAAATGCAT 201980 || ||| | || |||| || ||||| | ||||||||||| ||||| |||||| Sbjct 2161544 ATCTTTTTCGGACCAATTTATTATCAAAAATTAAAACATATGGTGCTTGATAAGATGCAT 2161485 Query 201981 GCGAGAAGTCATGGTCAAGTAACAACATTACATCGTCAACCAAACTGTGGTCGGTCCCAA 202040 || ||| | |||| | || ||| | | ||||||| | ||||| || | Sbjct 2161484 GCTAGAGCTAGAGGTCCGAGAGCAGTGTTAACTAGACAACCAACCGAAGGTCGTTCAAGA 2161425 Query 202041 GGTGGTGGATTAAGATTTGGAGAAATGGAAAAAGATTGTATTTTGGTTCATGGGGCCACA 202100 | ||||||||||||||| || || ||||||| ||| ||| | | | ||||||| | Sbjct 2161424 GATGGTGGATTAAGATTGGGGGAGATGGAAAGAGACTGTGTAATTGCCTATGGGGCATCG 2161365 Query 202101 CAATTTTTAAATGAAAGAATGTTTTTGTATTCAGATCCTTTTCAAATCGATGTGTGTACA 202160 || || ||| ||||||| || | ||| ||| ||| ||||| | |||| || |||| Sbjct 2161364 CAGTTGTTACTTGAAAGATTGATGTTGAGTTCCGATGCTTTTGATGTCGACGTTTGTAAT 2161305 Query 202161 AATTGTGGAATGAT 202174 |||||||| |||| Sbjct 2161304 AATTGTGGGTTGAT 2161291 >seq1 Length=4889271 Score = 98.7 bits (108), Expect = 1e-15 Identities = 226/336 (67%), Gaps = 16/336 (5%) Strand=Plus/Minus Query 180550 AGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATAT 180609 |||||| ||| | ||||| | ||||||||||||||||||||| || ||| |||||| Sbjct 1781788 AGAAGGCGATCTTGGACCTGTGTATGGATTTCAATGGAGACATTTTGGTGCTAAATATAA 1781729 Query 180610 TGACTGTGATACCAACTATATCGGGCAAGGTA-TAGACCAATTAAGCCAAGTTATAGAAA 180668 ||||||||||| |||| |||||| ||| | | || ||| || ||||||||| | | Sbjct 1781728 AGACTGTGATACTGACTA-CTCGGGCCAGGGAGTTGATCAACTAGCCCAAGTTATCCATA 1781670 Query 180669 CTATAAAAAATAATCCCGAATGCCGAAGAATAATCATAGATAGTTGGAATGTATCACAAT 180728 | |||| ||||| | ||||||| || || | |||||| || | | Sbjct 1781669 AATTGAAAACCAATCCATATGATAGAAGAATCATTATGTCTGCTTGGAACCCTCCAGATT 1781610 Query 180729 TACCAGATATGGCTCTTCCACCATGTCAC-TGTTTGGTACAATTTTATGTTA-------G 180780 | ||| | ||||| | || ||||| ||| ||||| || || ||||| || | Sbjct 1781609 TTCCAAAGATGGCATTACCGCCATGCCACGTGTTTAGT-CAGTTTTACGTGAATTTCCCC 1781551 Query 180781 AAATAA-----AATTTATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTA 180835 ||| || | | || |||| |||||||||||||| ||| | ||| | Sbjct 1781550 AAAGAAGGCAGACCAAAGTTGAGTTGCTTGTTGTATCAAAGATCCTGTGATATGGGACTT 1781491 Query 180836 GGTGTACCATATAATATTGCTTTCTATTCATTTTTG 180871 || || |||| |||||||||| ||| |||| ||| Sbjct 1781490 GGAGTGCCATTCAATATTGCTTCTTATGCATTGTTG 1781455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655279942663000