Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq3 93.3 5e-14 seq1 86.0 8e-12 >seq3 Length=3000806 Score = 93.3 bits (102), Expect = 5e-14 Identities = 175/255 (69%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 193347 ATTTTTATAGGGCCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCAT 193406 || ||| | || |||| |||||| || | ||||| ||||| ||||| |||||| Sbjct 2161544 ATCTTTTTCGGACCAATTTATTATCAAAAATTAAAACATATGGTGCTTGATAAGATGCAT 2161485 Query 193407 GCTAGAAGTCATGGGCAAGTGACTACT-TTACATCGACAACCAAATTGTGGTCGTTCTCA 193465 ||||| || | || | || | | ||| | ||||||||| |||||||| Sbjct 2161484 GCTAG-AGCTAGAGGTCCGAGAGCAGTGTTAACTAGACAACCAACCGAAGGTCGTTCAAG 2161426 Query 193466 AGGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCTAC 193525 || ||| || |||||||| || || ||||||| ||||||| | | | | |||| || | Sbjct 2161425 AGATGGTGGATTAAGATTGGGGGAGATGGAAAGAGACTGTGTAATTGCCTATGGGGCATC 2161366 Query 193526 TCAATTCTTAAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGCAC 193585 || || ||| ||||||| || | ||| ||| ||| ||||| | ||||| ||||| | Sbjct 2161365 GCAGTTGTTACTTGAAAGATTGATGTTGAGTTCCGATGCTTTTGATGTCGACGTTTGTAA 2161306 Query 193586 AGAATGTGGTATGAT 193600 | ||||| |||| Sbjct 2161305 TAATTGTGGGTTGAT 2161291 >seq1 Length=4889271 Score = 86.0 bits (94), Expect = 8e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 171700 GAATTTTTAGATTTATGCGGGTTTACTGAAAGAAAAGAAGGTGATTTAGGTCCAATTTAT 171759 |||| ||| |||| | ||||| || | | | |||||| ||| | || || | ||| Sbjct 1781823 GAATATTTGGATTCAATTGGGTTGACAAATAACAGAGAAGGCGATCTTGGACCTGTGTAT 1781764 Query 171760 GGATTTCAATGGAGACATGCAGGGGCTCAATATATCGACTGTTATACAGATTACACAGGA 171819 |||||||||||||||||| || ||| |||||| |||||| |||| || ||| | || Sbjct 1781763 GGATTTCAATGGAGACATTTTGGTGCTAAATATAAAGACTGTGATACTGACTACTCGGGC 1781704 Query 171820 CAAGGAGTGGACCAATTAAGTCAAACTATTAATACTTTACAAAACAACCCAGAAAGTAGA 171879 || ||||| || ||| || ||| ||| ||| || ||| ||| ||| | |||| Sbjct 1781703 CAGGGAGTTGATCAACTAGCCCAAGTTATCCATAAATTGAAAACCAATCCATATGATAGA 1781644 Query 171880 AGGAT 171884 || || Sbjct 1781643 AGAAT 1781639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628531145003520