Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1 185 2e-41 seq4 170 4e-37 seq3 154 3e-32 seq7 111 3e-19 >seq1 Length=4889271 Score = 185 bits (204), Expect = 2e-41 Identities = 180/232 (78%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || ||| ||||||| ||||||||||| || || || || |||| Sbjct 2093801 TACCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAG 2093860 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | |||| || ||||| | ||| || |||||||| || | ||||||||| ||||| | Sbjct 2093861 ACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTG 2093920 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||||||||| | || ||||| ||||| || ||| || ||| | Sbjct 2093921 GAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 2093980 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTAT 82813 |||||||||| || || || || || || ||||| || || || |||||||| Sbjct 2093981 CTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATTAT 2094032 Score = 183 bits (202), Expect = 6e-41 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || ||| ||||||| ||||||||||| || || || || |||| Sbjct 2093573 TACCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTAGTCAG 2093632 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | |||| || ||||| | ||| || |||||||| || | ||||||||| ||||| | Sbjct 2093633 ACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTG 2093692 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||||||||| | || ||||| ||||| || ||| || ||| | Sbjct 2093693 GAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 2093752 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||||| || || || || || || ||||| ||||| || ||||| Sbjct 2093753 CTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093801 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||||||| | || ||| || |||| ||||||||||| || || || || ||||| Sbjct 2093346 ACCACCTCTCAATCTCAAAACCAAATGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGA 2093405 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | |||| || ||||| | ||| || |||||||| || | ||||||||| ||||| || Sbjct 2093406 CAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGG 2093465 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || |||||||| ||||||||||| | || ||||| ||||| || ||| || ||| || Sbjct 2093466 AATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 2093525 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||| || || || || || || ||||| ||||| || ||||| Sbjct 2093526 TTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093573 >seq4 Length=2649207 Score = 170 bits (188), Expect = 4e-37 Identities = 169/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||||||| | || || || |||| |||||||||||| || ||||| || ||||| Sbjct 2557214 ACCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGA 2557273 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || |||| || ||||| | |||||| ||||||||||| | ||||||||| || || || Sbjct 2557274 AAGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 2557333 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || ||||| || ||||||||||| | ||| ||||| ||||| || || || ||| || Sbjct 2557334 AATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGAC 2557393 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801 |||||| || || || || || ||||| || || || || Sbjct 2557394 TTCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAACGAA 2557432 >seq3 Length=3000806 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||||||| | || || ||||||| || ||||| || || || || || ||||| Sbjct 835445 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGA 835504 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | ||||||| ||||| | |||||| ||||||||||| | |||||||||||| || || Sbjct 835505 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGG 835564 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || ||||| || ||||| ||||| | ||| ||||| ||||| || || | ||| || Sbjct 835565 AATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGAC 835624 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| | || || ||||| || || || || || || || || ||||| Sbjct 835625 TTCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCAT 835672 >seq7 Length=1353399 Score = 111 bits (122), Expect = 3e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 143948 AGATAAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCAGTCTTGCATATAGAACT 144007 |||||||||||| ||||| |||||| | |||||||| |||||||| ||| | Sbjct 595036 AGATAAAGATGAATGGACGCTATGGAAAGGCCGTTCTGATCCAGTATTGCATATCGAATT 594977 Query 144008 TAGGAGATGGGCTGATGTTTTTATTATAGCGCCCTTAACAGCAAATACGTTAGCAAAAAT 144067 || |||||||| |||||||| || || || || ||||| |||||||| ||| | ||||| Sbjct 594976 GAGAAGATGGGCCGATGTTTTGATCATCGCTCCATTAACTGCAAATACTTTATCTAAAAT 594917 Query 144068 AGCCAATGGTATATGCGATAATTT 144091 ||| |||| |||||||||| || Sbjct 594916 TGCCCTTGGTTTATGCGATAACTT 594893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981827111942373