Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2 205 2e-47 seq1 150 4e-31 >seq2 Length=4132043 Score = 205 bits (226), Expect = 2e-47 Identities = 567/865 (66%), Gaps = 11/865 (1%) Strand=Plus/Plus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 |||| ||||||||||||||| | ||| | | || || | | | ||||| | | Sbjct 214862 ACTACTTTGGTTTCAAAACTTTGGAAAGATCCTACTTGTTGAGAATTAATGGTAAAGTTG 214921 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATT- 110420 |||| | || |||||| || | | | ||||| |||||||| || || | |||||| Sbjct 214922 CTGAAAGACCACAACACTTGGTCATGAGAGTTGCTATTGGTATCCACGGTGAAGATATTC 214981 Query 110421 -AAAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCC 110479 ||| |||| ||| ||| || | | | || | | ||||||| |||| Sbjct 214982 CAAAAGTGTTG--GAAACTTACAATTTGATGTCTCTCAAATATTTCACTCATGCTTCTCC 215039 Query 110480 TACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAAT 110539 || | |||||||| || ||| | | ||| || ||||||| || ||| | | || Sbjct 215040 AACATTGTTTAACGCTGGTACTCCTAATGCCCAAATGTCTTCTTGTTTCCTTGTGGCCAT 215099 Query 110540 TAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAA 110599 || |||| || ||||| ||||||| ||| || | ||| ||| || |||| ||| Sbjct 215100 GAAGAATGACTCCATTGATGGTATTTTTGAAACTTTGAAACAAATGGCCATTATCAGTAA 215159 Query 110600 AAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGC 110659 | || |||| || |||||| | ||| | | ||||| | || | || | |||| || Sbjct 215160 ACACGCTGGCGGTATTGGTTTGCACATCAACAATATTAGATCTACTGGTTCTTATATTGC 215219 Query 110660 AACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGC 110719 | || ||| | || | || || |||||||||| ||||| |||||| |||| || Sbjct 215220 TGGTACTAATGGTACCTCTAACGGTATTATTCCAATGTTGAGAGTTTTCAACAACACCGC 215279 Query 110720 AAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACC 110776 | |||||| ||||||||||| || ||| ||| | ||||| || ||| | ||||| Sbjct 215280 CAGATATGTTGATCAAGGTGGTAACAAAAGACCTGGTGCCTTTGCCATATATGTTGAACC 215339 Query 110777 TTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACA 110836 ||||| |||||||| ||||| ||| | || | | || ||||| || |||||| Sbjct 215340 ATGGCACTCAGATATCTTTGATTTCATTGATATCAGAAAGAATCATGGTAAAGAAGAAAT 215399 Query 110837 AAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896 || || | |||||||| || | ||||| || || ||||| ||||| | ||| | Sbjct 215400 CAGGGCCAGAGATTTATTCCCAGCTTTATGGATCTCCGACTTATTTATGAAGAGAGTTGA 215459 Query 110897 AGAAAATGGCATG--TGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTA 110954 | | || || | ||| | | | | ||| || || ||| | |||| Sbjct 215460 AAAGAA--CCAAGACTGGACCTTGTTTTCCCCTAATGAAGCTGAAGGTTTGGCTGACACT 215517 Query 110955 TATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAA 111014 ||||| |||| || |||| |||||| || |||||||||| |||||||| | | | | Sbjct 215518 TATGGTGAAGAATTCGAAGCCCTTTATGAGAAATATGAAAGAGAAGGCAGAGGTAGAAGA 215577 Query 111015 CAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACT 111074 || || ||| | | |||| || || | ||| | ||| ||||||||| ||| Sbjct 215578 ACCGTTAAGGCCCAAAAGTTGTGGTACAGCATTTTGGAAGCTCAAACTGAAACTGGTACT 215637 Query 111075 CCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACA 111134 || | || |||||||||||| | |||| ||||| || |||| |||| | || Sbjct 215638 CCATTCATGTTGTATAAAGATGCTTGTAATGCTAAATCCAACCAAAAGAATCTTGGTCTT 215697 Query 111135 ATTAAGTCTAGTAATTTGTGCTGTG 111159 || || ||| || ||||| |||| Sbjct 215698 ATCAAATCTTCCAACTTGTGTTGTG 215722 Score = 93.3 bits (102), Expect = 1e-13 Identities = 132/182 (73%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 305306 AGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATG 305365 ||||| | ||||| |||| || |||| ||||| || |||||| |||||| | | Sbjct 2253566 AGACACATTAATGATGGTGATATCGTGTTGTTTAATAGACAGCCATCATTGCATAGATTA 2253507 Query 305366 TCTATGATGGCTCATAAAGTCAAAGTATTATC--TGGATTGACATTTCGATTAAATGTAA 305423 || || || | ||| | | |||| | | | | |||| || ||| |||| |||| Sbjct 2253506 TCGATTTTGTCGCATTACGCCAAAAT-TAAGCCTTGGAGA-ACTTTTAGATTTAATGAGT 2253449 Query 305424 GTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTC 305483 ||| ||||||||| |||||||| ||||||||||| ||||||||||| |||| || || | Sbjct 2253448 GTGTTTGTACGCCATATAATGCCGATTTTGATGGTGATGAAATGAACTTGCACGTTCCAC 2253389 Query 305484 AA 305485 || Sbjct 2253388 AA 2253387 >seq1 Length=4889271 Score = 150 bits (166), Expect = 4e-31 Identities = 288/419 (69%), Gaps = 4/419 (1%) Strand=Plus/Minus Query 131765 TTATTTGATGCTGTAAATAAATTTCC-TGCAATTAAAAAGAAAGCAGAATGGGCTATTAA 131823 |||||| |||| | ||| | |||| |||| ||||| | |||||||| ||||| ||| Sbjct 3873732 TTATTTAATGCAATTGATACAATTCCATGCA-TTAAAGAAAAAGCAGACTGGGCGCTTAG 3873674 Query 131824 ATGGATTCAAGATGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGA 131883 ||||||| ||||||| |||| ||| || |||| | ||||| |||||| ||||| Sbjct 3873673 ATGGATTGAAGATGAAGACGCTTTATTTGCTGAAAGATTAGTAGCATTTGCTGCCGTTGA 3873614 Query 131884 AGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGAT 131943 ||||||||| ||||| ||| ||||| | | || |||||||| ||||| | || | || Sbjct 3873613 AGGTATATTTTTTTCCGGTTCTTTCGCTTCGATATTTTGGCTCAAGAAAAGAGGTCTTAT 3873554 Query 131944 GCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATT 132003 ||| || || | || |||||| | || || | | ||||||| | |||||||| || Sbjct 3873553 GCCCGGTCTTACTTTCTCCAATGAGTTGATTTGTCGCGATGAAGGTCTTCATACTGATTT 3873494 Query 132004 TGCTATATTAATCTATAGAAAATTTGCTGATAAACTTGATGAAAATAATA-TTAAACAAC 132062 ||| || | ||| | || | | |||| ||||| | | |||| || | || Sbjct 3873493 TGCCTGTTTGTTGTATTCGCATTTGGAAAACAAACCTGATGCAGA-AATAGTTGATAAAA 3873435 Query 132063 TTATAAGCGAAGCAGTTGATATCGAGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATT 132122 | |||| || || ||||| || || ||| | | || ||||| || || || Sbjct 3873434 TAATAACAGAGGCGGTTGAAATTGAAAAGCGTTATTTTGACGAAGCATTATCTGTTTCTT 3873375 Query 132123 TGATTGGGATGAATGCTGACTCTATGAAGGAGTACATTGAATTCGTTGCTGATCGTTTA 132181 || |||| ||||| ||| | ||||| ||||| |||| || || |||||| | ||| Sbjct 3873374 TGCTTGGAATGAACGCTTCATTGATGAATCAGTACGTTGAGTTTGTGGCTGATAGATTA 3873316 Score = 129 bits (142), Expect = 1e-24 Identities = 362/549 (66%), Gaps = 9/549 (2%) Strand=Plus/Minus Query 131465 ATGTATAAGAAATCTGTTGCGGCCTTCTGGACTGTTGAAGAGATCGATATGACCAAAGAT 131524 ||||| ||||| ||| || | || ||||||| |||||| || || ||| |||||| Sbjct 4564030 ATGTACAAGAAGGCTGAAGCCTCTTTTTGGACTGCTGAAGAAATTGACTTGAGTAAAGAT 4563971 Query 131525 ATTGATGATTGGGAAAA---ATTAACCTTGAATGAAAAAGATTTTGTTTCCAAAGTTCTT 131581 | | || ||| | || ||| | ||||||| | |||| |||||| ||| | Sbjct 4563970 TTGCACGACTGGAACAACAGATTGAATGCTAATGAAAGATATTTCATTTCCAGAGTCTTG 4563911 Query 131582 GCATTCTTCGCCGGAAGTGATGGCATTGTTATTGAAAATCTTGTTATTAATTTCATTCAA 131641 |||||||| || | ||||| || || |||| ||||| | ||| || ||| | Sbjct 4563910 GCATTCTTTGCTGCTAGTGACGGTATCGTTAACGAAAACTTGGTTGAAAACTTCTCTGCC 4563851 Query 131642 GAAATTGATATTCCTGAAGTAACATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATT 131701 ||| || | ||| |||| | || |||||| || ||| | | ||| || Sbjct 4563850 GAAGTTCAATGTCCAGAAGCCAAATGTTTCTACGGTTTCCAAATCATGATGGAAAACATA 4563791 Query 131702 CATAGCGAGATGTATTCATTATTGATTGAGAGTCTTGTTAAAAATGAAGATGA-TAAAAA 131760 ||| || | ||||| || |||||||| | | | |||| || | | || | || Sbjct 4563790 CATTCTGAAACTTATTCTTTGTTGATTGATACTTATATTAAGGATCCAAAAGAATCTGAA 4563731 Query 131761 TAAATTATTTGATGCTGTAAATAAATTTCC--TGCAATTAAAAAGAAAGCAGAATGGGCT 131818 | || ||| ||||| | | || | ||| || | |||| || ||||| || ||||| Sbjct 4563730 TTC-TTGTTTAATGCTATTGA-AACTATCCCATGTA-TTAAGAAAAAAGCTGACTGGGCA 4563674 Query 131819 ATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGT 131878 | | |||||| | ||||| ||| ||| |||| | || || |||||| | Sbjct 4563673 TTGAGATGGATCAATGATGACCAAGCTTTGTTTGGCGAAAGATTGGTTGCCTTTGCTGCT 4563614 Query 131879 GTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGA 131938 ||||||||||| ||||| || ||| |||| | ||||||||||| | || ||| | || Sbjct 4563613 GTTGAAGGTATTTTCTTCTCTGGTTCTTTTGCTTCTATCTTTTGGTTAAAAAAGAGAGGT 4563554 Query 131939 TTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACT 131998 ||||||| || | | || || ||| |||| || | |||||||||| |||||||| Sbjct 4563553 ATGATGCCAGGTTTAACCTTCTCTAATGAATTGATTTGCAGAGATGAAGGTTTGCATACC 4563494 Query 131999 GAATTTGCT 132007 || || ||| Sbjct 4563493 GACTTCGCT 4563485 Score = 105 bits (116), Expect = 2e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131804 AAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTACAAGACTT 131863 ||||| || |||||| | | |||||| | |||||| ||| ||| | |||| | Sbjct 4012836 AAAGCCGACTGGGCTTTGAGATGGATCAACGATGATGAGGCTTTATTTGGTGAAAGATTG 4012895 Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923 || || |||||| |||||||||||| ||||| || ||| |||| | | ||||| ||| Sbjct 4012896 GTTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCTTTTGCTTCCATCTTCTGG 4012955 Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGAT 131983 | || ||| | || |||||||| || | | || ||||| || | || || |||||| Sbjct 4012956 TTGAAAAAGAGGGGTTTGATGCCAGGGTTGACTTTCTCCAACGAACTTATTTCCAGAGAT 4013015 Query 131984 GAAGCATTGCATACTGAATTTGC 132006 |||| ||||| || || ||||| Sbjct 4013016 GAAGGTTTGCACACAGACTTTGC 4013038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812693557727