Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1 127 5e-24 seq4 102 2e-16 seq3 86.0 1e-11 >seq1 Length=4889271 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || | || || ||||| |||||||||||||| ||| ||||||| Sbjct 2093798 CAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCTGAC 2093739 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||||||||| || ||||| ||| || ||| ||| Sbjct 2093738 ACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAA 2093679 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | || || || || ||||| ||||||||||| || || ||| | || |||||| | Sbjct 2093678 AGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATT 2093619 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || ||||| ||||| | ||| | ||||||||| Sbjct 2093618 CAAAAAGAATCTACATTGCACTTGGTTTTGAGA 2093586 Score = 125 bits (138), Expect = 2e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || ||||| |||||||||||||| ||| ||||||||| | || || ||| Sbjct 2094005 ACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCC 2093946 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || ||| |||||| | || || || || ||| Sbjct 2093945 AAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATTTTTGCTGGTAAG 2093886 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| || || ||| | || |||||| | || ||||| ||||| | ||| Sbjct 2093885 CAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATTCAAAAAGAATCTACATTGCAC 2093826 Query 206374 CTTGTTTTGAGA 206385 | ||||||||| Sbjct 2093825 TTGGTTTTGAGA 2093814 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || | || || ||||| |||||||||||||| ||| ||||||| Sbjct 2093570 CAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCTGAC 2093511 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||||||||| || ||||| ||| || ||| ||| Sbjct 2093510 ACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAA 2093451 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | || || || || ||||| ||||||||||| || || ||| | || |||||| | Sbjct 2093450 AGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATT 2093391 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || ||||| ||||| | || | ||||||||| Sbjct 2093390 CAAAAAGAATCTACATTGCATTTGGTTTTGAGA 2093358 >seq4 Length=2649207 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| || || |||||||| ||| ||| ||||| | || Sbjct 2557426 AAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCATTGACAAT 2557367 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || || ||||||||||| |||||||| ||| || ||| |||||| | ||||| Sbjct 2557366 GTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTGATCTTT 2557307 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || || ||||||||||| || || | | || ||||| |||| ||||| ||| Sbjct 2557306 GCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAAAAAGAATCT 2557247 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 ||| | || | || |||||| Sbjct 2557246 ACTTTGCATTTGGTCTTGAGA 2557226 >seq3 Length=3000806 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| |||||||| ||| || || |||||| | ||||| || || || Sbjct 835588 AAGATCCAAGACAAAGAAGGTATTCCACCTGATCAACAAAGATTGATCTTTGCTGGTAAA 835529 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| || |||||| | || |||||| |||| || || || || | ||| Sbjct 835528 CAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATCCAAAAGGAATCCACCTTGCAC 835469 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 835468 TTGGTCTTGAGA 835457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820694005447