Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1 259 4e-64 seq3 95.1 1e-14 >seq1 Length=4889271 Score = 259 bits (286), Expect = 4e-64 Identities = 423/602 (70%), Gaps = 18/602 (3%) Strand=Plus/Minus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 || |||||| || | ||||| | |||||||| || |||||||||||||| || || | Sbjct 4564072 AGATTTGTCTTGATGCCAATCAAGTATCATGAAATCTGGCAAATGTACAAGAAGGCTGAA 4564013 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTGC 43815 || || |||||||| || |||||| |||| |||| |||||| || |||| | |||| Sbjct 4564012 GCCTCTTTTTGGACTGCTGAAGAAATTGACTTGAGTAAAGATTT-GCACGACTGGAACAA 4563954 Query 43816 ---ATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872 ||| || | | |||| | |||| || || || ||||| || |||||||| || Sbjct 4563953 CAGATTGAATGCTAATGAAAGATATTTCATTTCCAGAGTCTTGGCATTCTTTGCTGCTAG 4563894 Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGA 43932 ||||| || || || ||||| |||||| || | |||||||||| ||||| Sbjct 4563893 TGACGGTATCGTTAACGAAAACTTGGTTGAAAACTTCTCTGCCGAAGTTCAATGTCCAGA 4563834 Query 43933 AGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAG 43992 ||| |||||| || || || ||||| || ||||| || ||||| |||| || Sbjct 4563833 AGCCAAATGTTTCTACGGTTTCCAAATCATGATGGAAAACATACATTCTGAAACTTATTC 4563774 Query 43993 TCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATC-GA----TTGTTTAAT 44047 | | |||| ||||| || || || ||| | | ||| ||| || ||||||||| Sbjct 4563773 TTTGTTGATTGATACTTATATTAAGGAT-----CCAAAAGAATCTGAATTCTTGTTTAAT 4563719 Query 44048 GCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAAT 44107 || || ||||| | || ||||| | ||||| |||||||| | | |||||| ||| Sbjct 4563718 GCTATTGAAACTATCCCATGTATTAAGAAAAAAGCTGACTGGGCATTGAGATGGATCAAT 4563659 Query 44108 --TCAA-ATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTC 44164 | | | | || ||||| ||| || | || || ||||| | ||| ||||| |||||| Sbjct 4563658 GATGACCAAGCTTTGTTTGGCGAAAGATTGGTTGCCTTTGCTGCTGTTGAAGGTATTTTC 4563599 Query 44165 TTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTG 44224 || || || || ||||| | || ||||||||||| || ||||| ||||||| || || Sbjct 4563598 TTCTCTGGTTCTTTTGCTTCTATCTTTTGGTTAAAAAAGAGAGGTATGATGCCAGGTTTA 4563539 Query 44225 ACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTG 44284 || || || ||||| || || | | |||||||| || ||| ||| || ||||||||| Sbjct 4563538 ACCTTCTCTAATGAATTGATTTGCAGAGATGAAGGTTTGCATACCGACTTCGCTTGCTTG 4563479 Query 44285 TT 44286 || Sbjct 4563478 TT 4563477 Score = 241 bits (266), Expect = 1e-58 Identities = 419/602 (70%), Gaps = 18/602 (3%) Strand=Plus/Plus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 || ||||| || | ||||| |||||||||| ||||||||||||||||| || || | Sbjct 4012452 AGATTTGTTTTGATGCCAATCAAATATCATGAAATATGGCAAATGTACAAGAAGGCTGAA 4012511 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTG- 43814 || ||||| ||||| || ||||| | || |||| |||||| | ||| | |||| || Sbjct 4012512 GCTTCATTCTGGACTGCTGAAGAGATCGACTTGAGTAAAGATAT-GCATGACTGGAATGA 4012570 Query 43815 CA--TTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872 || || || | | |||| | |||| | ||| || ||||| || |||||||| || Sbjct 4012571 CAAGTTGAATGCCAACGAAAGATATTTCCTCTCTAGAGTGTTGGCTTTCTTTGCTGCTAG 4012630 Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGA 43932 || || || ||||||||||| |||||| || | ||||| |||| ||||| Sbjct 4012631 TGATGGTATTGTCAATGAAAACTTGGTTGAAAACTTCTCTGCCGAAGTGCAATGTCCAGA 4012690 Query 43933 AGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAG 43992 ||| || |||||||| || |||||| || ||||||||||| || |||| ||| Sbjct 4012691 AGCCAAATTCTTTTATGGTTTCCAAATTATGATGGAAAATATTCACTCTGAAACTTACTC 4012750 Query 43993 TCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATC-GATTGTTTA----AT 44047 | | || || ||||| |||||||| || | | ||| ||| || | |||| || Sbjct 4012751 TTTGCTAATTGATACTTACATCAAGGAC-----CCAAAAGAATCTGAATTTTTATTCAAT 4012805 Query 44048 GCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAAT 44107 || || ||||| | || || || || ||||| |||||||| | | |||||| || Sbjct 4012806 GCCATTGAAACTATCCCATGTATAAAGCAAAAAGCCGACTGGGCTTTGAGATGGATCAAC 4012865 Query 44108 TCAAATGATTCTTT---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTC 44164 |||| |||| ||| ||| || | || || ||||| | ||| ||||| |||||| Sbjct 4012866 GATGATGAGGCTTTATTTGGTGAAAGATTGGTTGCCTTTGCTGCTGTTGAAGGTATTTTC 4012925 Query 44165 TTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTG 44224 || || || || ||||| |||| || ||||| || || | ||||||||||| |||||| Sbjct 4012926 TTCTCTGGTTCTTTTGCTTCCATCTTCTGGTTGAAAAAGAGGGGTTTGATGCCAGGGTTG 4012985 Query 44225 ACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTG 44284 || || || || || | || | |||||||| || || || ||||| || ||| Sbjct 4012986 ACTTTCTCCAACGAACTTATTTCCAGAGATGAAGGTTTGCACACAGACTTTGCCTGTTTG 4013045 Query 44285 TT 44286 || Sbjct 4013046 TT 4013047 Score = 206 bits (228), Expect = 2e-48 Identities = 584/873 (67%), Gaps = 33/873 (4%) Strand=Plus/Minus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 ||||| | ||||| || | || ||||| |||||||||||||||||||||||| | || Sbjct 3874074 TTTGTATTATTTCCCATAAAGTACCATGAAATATGGCAAATGTACAAAAAAGCAGAAGCT 3874015 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGA--TTGCA 43816 || || ||||| || || ||| ||||| | ||| || || ||| |||||| | | Sbjct 3874014 TCTTTCTGGACCGCCGAGGAAATTGATCTTGGTAAGGATTT-GCATGATTGGAACTATAA 3873956 Query 43817 TTAAAACCACAAGAAAAACATTTT-ATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGA 43875 | || ||| || | |||| || || || | || |||||||| || || Sbjct 3873955 GTTGAATAGCAATGAACAGTTTTTCATTTCCAGAGTGCTAGCATTTTTTGCCGCATCGGA 3873896 Query 43876 CGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAG--AAGTTCAATTACCAGAA 43933 || || || ||||| ||| | || | || | | | |||| || | || ||| Sbjct 3873895 TGGCATCGTTAATGAGAATCTTGTACA--GAATTTCTCTACCCAAGTACAGATTCCCGAA 3873838 Query 43934 GCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGT 43993 || ||| |||||||| |||||||| || || ||| ||||||| || | ||| | Sbjct 3873837 GCCAAATGCTTTTATGGTTTTCAAATAATGATGGAGAATGTTCATTCAGAGACATACTCT 3873778 Query 43994 CTTCTGATAGATACGTACATCAAAGATGG-GCACGAGAAGCATCGATTGTTTAATGCGAT 44052 || |||||||||| || || ||| | || | | || || |||||||| || Sbjct 3873777 CTGTTGATAGATACTTATATTCTGGATCCTGAACAGGCCGAATTT-TTATTTAATGCAAT 3873719 Query 44053 AGAAACAGTACC-TGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAATT 44108 || ||| | || ||| |||||| | |||||||||||||| |||| |||||| | || Sbjct 3873718 TGATACAATTCCATGC-ATTAAAGAAAAAGCAGACTGGGCGCTTAGATGGATTGAAGATG 3873660 Query 44109 CAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTT 44168 | | | || |||| ||| || | || || ||||| | || ||||| || || |||| Sbjct 3873659 AAGACGCTTTATTTGCTGAAAGATTAGTAGCATTTGCTGCCGTTGAAGGTATATTTTTTT 3873600 Query 44169 CAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGT 44228 | || || || || | ||||||||| | |||||| ||||| | ||||| || | || | Sbjct 3873599 CCGGTTCTTTCGCTTCGATATTTTGGCTCAAGAAAAGAGGTCTTATGCCCGGTCTTACTT 3873540 Query 44229 TTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGT--T 44286 | || |||||||| || |||| |||||||| | ||| |||||||| || |||| | Sbjct 3873539 TCTCCAATGAGTTGATTTGTCGCGATGAAGGTCTTCATACTGATTTTGCCTGTTTGTTGT 3873480 Query 44287 ACTTGGATATCTAGGAGACGATAAGCCTTCATGTA-AGACAATTACAGATATTGTTGTAG 44345 | | | || | ||| | | || || | ||| | | | | || | || | || Sbjct 3873479 ATTCGCAT---TTGGAAA--ACAAACC-TGATGCAGAAATAGTTGATAAAATAATAACAG 3873426 Query 44346 AGGCAGTAAAGATAGAACAAGAAT--TTATGACAACAGCATTACCTGTAAATTTAATAGG 44403 |||| || | || ||| ||| | || |||| | ||||||| |||| ||| | || Sbjct 3873425 AGGCGGTTGAAATTGAA-AAGCGTTATTTTGACGA-AGCATTATCTGTTTCTTTGCTTGG 3873368 Query 44404 AATGAATGAACTT--TTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTG 44461 |||||| | ||| |||||||| || || |||| | | || ||| | ||| | | Sbjct 3873367 AATGAACG--CTTCATTGATGAATCAGTACGTTGAGTTTGTGGCTGATAGATTATTGATT 3873310 Query 44462 GAACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATT 44521 |||| | | || ||| | ||| || || ||||||||||||||||| ||| Sbjct 3873309 TCTTTGGGCAGAAAAAAGATCTACAATGTTACTAATCCATTTGATTTTATGGAAAACATT 3873250 Query 44522 TCGTTGGAAGGCAAAACAAACTTTTTTGAAAAA 44554 || |||| ||| ||||| || || ||||| ||| Sbjct 3873249 TCATTGGCAGGGAAAACTAATTTCTTTGAGAAA 3873217 >seq3 Length=3000806 Score = 95.1 bits (104), Expect = 1e-14 Identities = 121/164 (74%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 115035 GTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTCGGCT 115094 |||||||| || |||| ||||||||||||||||| ||| ||||| || | ||| || || Sbjct 1496332 GTCATACGAGATGGAATAGCATGCGGATTAATAACCAAATCTGGAACCACCCCTTCTGCA 1496273 Query 115095 GTGAACGGCATGTCGTGCTGATCGTACATCATTCCACAAGTTCCTTTTTGAGCG-GTAAA 115153 || |||||||| || | || || | || ||| ||| ||||||||| || || | Sbjct 1496272 GTAAACGGCATATCTTCATGTCTATAAGTGATACCAATAGTACCTTTTTGACCGTGTCTA 1496213 Query 115154 CGATGCAAATTTATCACCAATCTCAGGTTCTCTGATTTTTCTCA 115197 || |||||||| |||||||| | || || || | |||||| Sbjct 1496212 -GAGGCAAATTTGTCACCAATTTGTGGCACTTTGGTGGTTCTCA 1496170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455966092035