Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2 246 4e-60 seq3 87.8 2e-12 seq1 87.8 2e-12 >seq2 Length=4132043 Score = 246 bits (272), Expect = 4e-60 Identities = 1117/1749 (64%), Gaps = 45/1749 (3%) Strand=Plus/Minus Query 110368 ATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTT 110427 ||||||||| |||||||| | |||| ||||| |||| | ||||||||||| | || Sbjct 216654 ATAGTACATACCGGTCTTCAAACCTTTCTTCCAACCGTAGAAATGCATAGAAGTCAATTT 216595 Query 110428 GGACATCGTTGGA--CTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGC 110485 ||| ||||| ||| |||| | ||||| |||| ||| |||||||| | Sbjct 216594 ACCCATAGTTGGGTCCTTGATGTGAATA--TTCATGGATTGAGATTGATCAATGAATGGA 216537 Query 110486 CCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAG 110545 | | | || |||| |||||| | | ||| ||| |||||||| || || Sbjct 216536 GCTCTATCAGCAGCCAAATCAATAATTTTCTTTTGAGAAATCTCCCAAACAGTTTTGTAC 216477 Query 110546 AGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC 110605 | || || | || | || || | || | || || || ||||| || | | Sbjct 216476 AAATCTTTCAATTCTTGAGGAATGTTTGGTAAGTTTTGAATAGAACCATTAGCACTAATG 216417 Query 110606 ATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGC 110665 || |||||||||| | ||||| | ||| || | | || || | | || Sbjct 216416 ATATGATCCTTCATTGAAGTAGACCATAAACCCATGTCAACCAAATCTTTTAACAAGTAT 216357 Query 110666 TTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTAT 110725 ||| || || ||| || || || || |||||| || ||||| | |||||| Sbjct 216356 GGGTTAACGATTTGAAATTCGCCAGCAAGAACTCTTCTGGAATAAATGTTAGAAGTGTAT 216297 Query 110726 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 110785 |||||||| |||||||| | |||||| ||||| | || || || ||||||||||| || Sbjct 216296 GGTTCAAAACATTCATTGTAACCCAAAATTTGGGAAGTAGAAGCAGTTGGCATTGGAGCA 216237 Query 110786 ATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG 110845 | ||| | | ||| | | ||| | || ||||| || || | | ||||| || Sbjct 216236 ACCAACAAAGAGTTTCTCAAACCATGCTTCTTGACTTTTTGTTTAACTTCGTCCCAATCC 216177 Query 110846 --TAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGG 110903 || | || ||||||| || |||| ||| |||| | | || ||||| || || | Sbjct 216176 CATAAGTCAG-TTGGTTTAACATTCC-ACAAGTCATAGGACAACAAACCTTGAGAAGCTG 216119 Query 110904 GAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 110963 ||||||| | | |||||||| | ||||| | |||| || ||| | ||||| | Sbjct 216118 GAGAACCTTGGTAAGTTTCATAAGTACCTTCAACAGCAGCTAACTCAGTGGAAGCCTCAA 216059 Query 110964 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAAT 111023 | || ||||| || |||||||| || ||||||||| | ||| || || || | Sbjct 216058 TAGCAGCATGATAAATAGTTTCAAAAATTTGAGCATTCAATTGCTTAGCCTCTGGAGATT 215999 Query 111024 CAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAG 111083 |||||| | | ||| || || ||||| || | |||||| ||||| | | |||||| Sbjct 215998 CAAATGGCAATCTCAACATCATGAAAACATCAGCCAAACCTTGGACACCAACAGCAATAG 215939 Query 111084 GTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAAATTTCTGTCAATG 111142 ||||||||| || ||||| ||| || ||| || ||||| || ||||||||||| Sbjct 215938 GTCTGTGTCTCAAGTTAGATCTTCTAGCT-TCTGGGACTGGATAGAAGTTTCTGTCAATA 215880 Query 111143 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAA 111202 | ||| | || ||||| |||| || | ||| ||||| | || ||| | | | || Sbjct 215879 ATCTTGTTCAAGTTCTTGGTCACAACTTTAGAGATATCATGCAACTTATCAAAGTTATAA 215820 Query 111203 GTGCGAGTCTCTTCATTGACATACTT---------TGGAAGGGCGATTGATGCCAAATTG 111253 || || ||||||| |||| | ||| | || | || ||||| || Sbjct 215819 GTAGCAGATTCTTCAT---CATATTCAACGAAAGCTGGTAATGCAACAGAAGCCAAGTTA 215763 Query 111254 CAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTC 111313 |||||||| || |||| | ||||| || || | |||||| ||| ||||||||| Sbjct 215762 CAAACAGCAGTTTCATTTTCATCTGAATATTCGACAATTTCACAACACAAGTTGGAAGAT 215703 Query 111314 TTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATG 111373 || || || | |||||||||||| || || || ||||| || || | |||| Sbjct 215702 TTGATAAGACCAAGATTCTTTTGGTTGGATTTAGCATTACAAGCATCTTTATACAACATG 215643 Query 111374 TAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGG 111432 | || || || || || || || | || | ||| | ||| ||| | | | || Sbjct 215642 AATGGAGTACCAGTTTCAGTTTGAGCTTCCAAAATGCTGTACCACAACTTTTGGGCCT-- 215585 Query 111433 TACAATGG--CGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGGCTTCAAACTC 111489 || || | | || | ||| | | || || || || |||||||| || || Sbjct 215584 --TAACGGTTCTTCTACCTCTGCCTTCTCTTTCATATTTCTCATAAAGGGCTTCGAATTC 215527 Query 111490 CTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACC 111549 ||||| | ||| | | |||| || | | || | || | | ||| | | Sbjct 215526 TTCACCATAAGTGTCAGCCAAACCTTCAGCTTCATTAGGGGAAAACAAGGTCCA--GTCT 215469 Query 111550 ACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 111607 ||| ||||| | |||||| || | ||| | ||||| | | || || | |||| Sbjct 215468 TGGTTCTTTTCAACTCTCTTCATAAATAAGTCGGAGATCCATAAAGCTGGGAATAAATCT 215409 Query 111608 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 111667 || || ||||| | ||| || || || | |||| ||| || | |||||| Sbjct 215408 CTGGCCCTGATTTCTTCTTTACCATGATTCTTTCTGATATCAATGAAATCAAAGATATCT 215349 Query 111668 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATT 111723 | ||||||||| |||| ||| | || | | || |||| | ||| |||||| Sbjct 215348 GAGTGCCATGGTTCAACATATATGGCAAAGGCACCAGGTCTTTTG-TTACCACCTTGATC 215290 Query 111724 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 111783 ||||| | || ||| ||| || || | | ||||||||||||||| | || ||| Sbjct 215289 AACATATCTGGCGGTGTTGTTGAAAACTCTCAACATTGGAATAATACCGTTAGAGGTACC 215230 Query 111784 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 111843 ||| || || |||| ||| | | | ||| | || | |||||||| |||||||| Sbjct 215229 ATTAGTACCAGCAATATAAGAACCAGTAGATCTAATATTGTTGATGTGCAAACCAATACC 215170 Query 111844 CCCAGCCCACTT--TGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATT 111901 ||||| || ||| | | || || | | | |||| || | ||||| | || Sbjct 215169 GCCAGCGTGTTTACTGATAATGGC-CA-TTTGTTTCAAAGTTTCAAAAATACCATCAATG 215112 Query 111902 GAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCA 111961 ||||| | ||| |||| | |||||| ||| ||||| || | | || |||||||| Sbjct 215111 GAGTCATTCTTCATGGCCACAAGGAAACAAGAAGACATTTGGGCATTAGGAGTACCAGCG 215052 Query 111962 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTC 112020 || || | ||||| | || ||| |||| ||| | | |||||| | ||| || || Sbjct 215051 TTAAACAATGTTGGAGAAGCATGAGTGAA-ATATTTGAGAGACATCAAATTGTAAGTTTC 214993 Query 112021 CAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTG 112080 ||| || ||| ||||| |||||||| || || || || | ||||| || || || Sbjct 214992 CAACACTTTTGGAATATCTTCACCGTGGATACCAATAGCAACTCTCATGACCAAGTGTTG 214933 Query 112081 TGGGGTTTC 112089 ||| |||| Sbjct 214932 TGGTCTTTC 214924 >seq3 Length=3000806 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 164592 CCAAATGGTGTGTATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATT 164651 |||| |||| |||||| | ||||| ||||| ||||| | | |||||||||||||| Sbjct 1863226 CCAATTGGTACTTATGGTAGAGTTGCTCCACGTTCCGGATTGACAGTGAAGCATGGTATC 1863167 Query 164652 CAAGTTGGTGCGGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTC 164711 |||||| ||||| |||||| | || ||| || ||||| ||||||| | | || Sbjct 1863166 AGCACTGGTGCTGGTGTAATTGATGCTGATTATCGTGGAGAAGTGAAAGTCGCTTTATTT 1863107 Query 164712 AATCACGGAGACAAAGACTTTGAGGTAAAGAAAGGGGA 164749 |||||| | ||||| ||||| | || ||||| || Sbjct 1863106 AATCACTCCAAAAAAGATTTTGAAATTAAAAAAGGTGA 1863069 >seq1 Length=4889271 Score = 87.8 bits (96), Expect = 2e-12 Identities = 170/247 (69%), Gaps = 8/247 (3%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| | ||| ||||||| |||||||||||| || ||||| | || Sbjct 4013039 GGCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTTGGAGAAAGTCAACCC 4012980 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGA 122776 |||||| | ||||| ||| |||||||| | || | ||| || || || |||||||| | Sbjct 4012979 TGGCATCAAACCCCTCTTTTTCAACCAGAAGATGGAAGCA-AAAGAACCAGAGAAGAAAA 4012921 Query 122777 TACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATC-- 122834 |||| || ||| ||||| |||| | | ||| | || | || || |||| Sbjct 4012920 TACCTTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAATAA---AGCCTCATCATCGT 4012864 Query 122835 -AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTT 122893 | |||| ||| ||||| | || || | || |||||||| | ||||| ||||| | Sbjct 4012863 TGATCCATCTCAAAGCCCAGTCGGCTTTTTGCTTTATACATGGGATAGTTTCAATGGCAT 4012804 Query 122894 CAAATAA 122900 ||||| Sbjct 4012803 TGAATAA 4012797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031945047200