Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 138 1e-27 seq1 82.4 9e-11 >seq2 Length=4132043 Score = 138 bits (152), Expect = 1e-27 Identities = 344/518 (66%), Gaps = 16/518 (3%) Strand=Plus/Minus Query 118364 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 118423 |||||| || ||||| || || | | || ||||| | || ||||| | || || || Sbjct 216132 ACCTTGAGAAGCTGGAGAACCTTGGTAAGTTTCATAAGTACCTTCAACAGCAGCTAACTC 216073 Query 118424 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTT 118483 | | ||||| | || || ||||| || ||||||||||| ||||||||| | ||| Sbjct 216072 AGTGGAAGCCTCAATAGCAGCATGATAAATAGTTTCAAAAATTTGAGCATTCAATTGCTT 216013 Query 118484 GGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGAC 118543 ||||| || ||||| | | || ||| || || ||||| || | ||||||||| Sbjct 216012 AGCCTCTGGAGATTCAAATGGCAATCTCAACATCATGAAAACATCAGCCAAACCTTGGAC 215953 Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT-CCACGGGATAAA 118602 ||| | |||| || | ||||||| ||||| | | ||| ||| || ||||| | Sbjct 215952 ACCAACAGCAATAGGTCTGTGTCTCAAGTTAGATCTTCTAGC-TTCTGGGACTGGATAGA 215894 Query 118603 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 118662 | || || || |||| | | || | || ||||| ||||| || | ||| ||||| | || Sbjct 215893 AGTTTCTGTCAATAATCTTGTTCAAGTTCTTGGTCACAACTTTAGAGATATCATGCAACT 215834 Query 118663 TTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA---------GGAAGGGCGA 118713 | || | | | || | || ||||||| |||| | | || | || | Sbjct 215833 TATCAAAGTTATAAGTAGCAGATTCTTCAT---CATATTCAACGAAAGCTGGTAATGCAA 215777 Query 118714 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGC 118773 || |||| ||||| |||| || |||| | ||| | || || | |||||| | Sbjct 215776 CAGAAGCCAAGTTACAAACAGCAGTTTCATTTTCATCTGAATATTCGACAATTTCACAAC 215717 Query 118774 ACAAGTTTGAACTCTTAATGGTGCCCAAG-TTCTTTTGATTTGACTTTGTGTTACACGCA 118832 ||||||| ||| || || | ||||| |||||||| || || || | ||||| ||| Sbjct 215716 ACAAGTTGGAAGATTTGAT-AAGACCAAGATTCTTTTGGTTGGATTTAGCATTACAAGCA 215658 Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870 || || || | |||| |||| || || || || ||||| Sbjct 215657 TCTTTATACAACATGAATGGAGTACCAGTTTCAGTTTG 215620 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/148 (73%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 179968 GGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTC 180027 ||||| ||||| |||| ||| | |||||| | ||||||||||| || | | ||| Sbjct 3374408 GGGAAAACACCATAGTAATCTCTACCAACAATTTTTAGACCAGCAACAGCTAAAGACTTA 3374467 Query 180028 GCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCCGTCCCTGCCTTG 180087 ||||| ||||| || |||| || || ||||||||| | || | || ||||| ||| Sbjct 3374468 GCGGAGTCACCTTCTGTCAAAATAAGAGTACACTTTTCGCTTTCTCTGGTTCCTGCTTTG 3374527 Query 180088 TTCGCGTCGTCCAAC-TTGGGAATACCA 180114 ||||| || ||||| ||||| ||||| Sbjct 3374528 TTCGCATCCACCAACTTTGGGTGTACCA 3374555 >seq1 Length=4889271 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| | ||| || || | ||| || ||||| || ||||| || || Sbjct 4013039 GGCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTTGGAGAAAGTCAACCC 4012980 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 |||||| | ||||| ||| ||||||||||| || | | ||| || ||||||||||| || Sbjct 4012979 TGGCATCAAACCCCTCTTTTTCAACCAGAAGATGGAAGCAAAAGAACCAGAGAAGAAAAT 4012920 Query 130135 CCCCTCCACACACGCGAACGCAA 130157 || || ||| || || |||| Sbjct 4012919 ACCTTCAACAGCAGCAAAGGCAA 4012897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435145886920