Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq4 172 1e-37 seq3 170 4e-37 seq1 158 3e-33 >seq4 Length=2649207 Score = 172 bits (190), Expect = 1e-37 Identities = 158/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||| || || |||||||||||| |||||||||| ||| || | |||||| || Sbjct 2557233 ACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAAAGGGTTCTGCCATCTTCC 2557292 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| || ||||||||||| | |||||||||| |||||||| || |||||||| Sbjct 2557293 AATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGA 2557352 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | ||| || | || || ||||| |||| ||||||||| | || || || ||| Sbjct 2557353 ATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTTTTA 2557412 Query 283071 CCCGTCAAAGTCTTAACGAA 283090 || |||||||| |||||||| Sbjct 2557413 CCAGTCAAAGTTTTAACGAA 2557432 Score = 104 bits (114), Expect = 5e-17 Identities = 170/245 (69%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 316947 AATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGC 317006 || ||||||||| || || |||| | ||| || || || | ||| || ||||| || | Sbjct 333989 AACGAAGTCAACAATGGAGGTGTCATCTTCAGAACCATCAATGTCGTGTTCAACGTAGAC 333930 Query 317007 AGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCAT 317066 || |||| ||| | | ||||| ||||| | |||||||| |||| || ||||| Sbjct 333929 GGTCTTCAATTCATCTTGGGATGGGAAACCTTCAACTTGACCGTTAGCAATAGCTCTCAT 333870 Query 317067 CAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAG 317126 || || || || |||||||| || || || || | ||| || | | || |||||| Sbjct 333869 CAAGGTAGATTTACCAGCACCGTTAGGACCACACAAACCGTATCTTCTACCTCTCTTCAA 333810 Query 317127 ATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATC 317186 | || | || |||||| | || ||| |||| || |||| |||||||||||| | Sbjct 333809 TCTCAATTGAGTTCTGTTCAACAAGATTTTAGCACCGTAAGCCAAAGAGAACTCACAGTT 333750 Query 317187 ACACA 317191 ||||| Sbjct 333749 ACACA 333745 >seq3 Length=3000806 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| || || ||| ||| ||||||||||||||||||| | || | ||||| || Sbjct 835464 ACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 835523 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| || ||||||||||| | |||||| ||| |||||||| || ||||||||| Sbjct 835524 AATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGG 835583 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | ||| || | || |||||||| || | ||||||||| || || || |||||| Sbjct 835584 ATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACTTCAAGGGTAATGGTCTTA 835643 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| || || |||||||| || ||||| || Sbjct 835644 CCCGTTAAGGTTTTAACGAAAATTTGCATCTT 835675 >seq1 Length=4889271 Score = 158 bits (174), Expect = 3e-33 Identities = 153/194 (79%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||||||||| ||||||||||||| |||| || | |||||| || | ||| || || |||| Sbjct 2093838 TTCTTTTTGAATGTTGTAGTCAGACAAG-GTTCTGCCATCTTCCAATTGCTTACCAGCAA 2093896 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 | ||||| | ||||||||| |||||||| ||||||||||| ||||| | || || Sbjct 2093897 AAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACAT 2093956 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 | || |||||||| |||| ||| ||||| | |||||| || ||||| || || ||||| | Sbjct 2093957 TGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGA 2094016 Query 283087 CGAATATCTGCATT 283100 |||| || |||||| Sbjct 2094017 CGAAAATTTGCATT 2094030 Score = 156 bits (172), Expect = 9e-33 Identities = 162/210 (77%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949 |||| ||| || || ||||||||| ||||||||||||| |||| || | |||||| || Sbjct 2093365 ACCAAATGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGACAAG-GTTCTGCCATCTTC 2093423 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 | ||| || || ||||| ||||| | ||||||||| |||||||| ||||||||||| Sbjct 2093424 CAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTG 2093483 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||||| | || || | || |||||||| |||| ||| ||||| | |||||| || || Sbjct 2093484 AATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTT 2093543 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || || ||||| || || || ||||| Sbjct 2093544 ACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093573 Score = 152 bits (168), Expect = 1e-31 Identities = 151/193 (78%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||||||||| ||||||||||||| |||| || | |||||| || | ||| || || |||| Sbjct 2093610 TTCTTTTTGAATGTTGTAGTCAGACAAG-GTTCTGCCATCTTCCAATTGCTTACCAGCAA 2093668 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 | ||||| | ||||||||| |||||||| ||||||||||| ||||| | || || Sbjct 2093669 AAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACAT 2093728 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 | || |||||||| |||| ||| ||||| | |||||| || ||||| || || ||||| | Sbjct 2093729 TGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGA 2093788 Query 283087 CGAATATCTGCAT 283099 | || || ||||| Sbjct 2093789 CAAAGATTTGCAT 2093801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739106120578