Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936155.1_202017- 01-05] 7 sequences; 19,567,216 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq3 104 2e-17 seq1 95.1 9e-15 >seq3 Length=3000806 Score = 104 bits (114), Expect = 2e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168 || ||||||| |||||| |||| ||| | ||| ||||||||||||||||| || | Sbjct 835446 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 835505 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 |||| | | || |||| || || || ||||||||||| | || ||||| | | Sbjct 835506 AAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTG 835563 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | |||||| || || ||||| || || ||| | || ||||||| |||||| Sbjct 835564 GAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGT--CAATAGTGTCGGAGGATTC 835621 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| ||||| ||||| | ||| || ||||| |||||||| Sbjct 835622 GACTTCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCAT 835672 >seq1 Length=4889271 Score = 95.1 bits (104), Expect = 9e-15 Identities = 166/237 (70%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| |||||| |||| ||| | || || ||||| |||||||| Sbjct 2093568 TTGCATACCACCTCTCAATCTCAAAACCAAGTGCAATGTAGATTCTTTTTGAATGTTGTA 2093627 Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | | || | || | || |||| ||||| || ||||| ||||| | || || | Sbjct 2093628 GTCAGACAAGGTTCTGC-CATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGT 2093686 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGC 44280 ||| || | ||||||||| || ||||| ||| || ||| | || ||||| | Sbjct 2093687 CTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGT--CAATAGTGTCAGA 2093744 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || |||| || || || || || || | |||||| || ||||||||||| Sbjct 2093745 AGATTCAACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093801 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169 || ||||||| |||||| |||| || | || || ||||| |||||||| || | | Sbjct 2093347 CCACCTCTCAATCTCAAAACCAAATGCAATGTAGATTCTTTTTGAATGTTGTAGTCAGAC 2093406 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 || | || | || |||| ||||| || ||||| ||||| | || || |||| || Sbjct 2093407 AAGGTTCTGC-CATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGG 2093465 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCC 44287 | ||||||||| || ||||| ||| || ||| | || ||||| | ||||| Sbjct 2093466 AATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGT--CAATAGTGTCAGAAGATTCA 2093523 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| || || || || || || | |||||| || ||||||||||| Sbjct 2093524 ACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2093573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990369288319