Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1 217 2e-51 >seq1 Length=4909981 Score = 217 bits (240), Expect = 2e-51 Identities = 569/858 (66%), Gaps = 15/858 (2%) Strand=Plus/Plus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 ||||||| || ||| | ||||| |||||||||||||| || | ||||| || |||| Sbjct 4604442 TTTGGTAGTCGGAAACTCTCTTTTCAAAGAAGTTAGTTTTACCGGCCAAAGAAATGTTTT 4604501 Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAAC 16029 ||||||| || || || || ||| | || ||| ||| || |||| | | Sbjct 4604502 CCATAAAGTCGAATGGGTTGGTAACATTGTAAAC--CTTCTTGTTGCCCAAAGCAACCAA 4604559 Query 16030 TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAG 16089 ||||| || || |||||||| | |||||| ||||| || | || || || | ||| Sbjct 4604560 CAATCTGTCAGCAACAAATTCAACATATTGGCACATCAATTTAGCGTTCATGCCCAAAAG 4604619 Query 16090 TCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGAT 16149 || || | ||| | || || ||| || ||| || || || || |||| || Sbjct 4604620 AGAAACTGGCAAAGCATCGGTAAAGTATTCTTTTTCAATAGTGACAGCCTCGGTAATAAT 4604679 Query 16150 ATCGGTGGCTCGTGTTTCA-GACGGTGTATGGTTT--AGGTGTTTAAACATTAGACACGC 16206 | | | |||| || || || ||| | |||| ||||| | || || Sbjct 4604680 CT---TTTCAACAATTTCTTGATTTGGTTTGTTTTGCAAGTGTGAAAACAACAAGCAAGC 4604736 Query 16207 GAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGG 16266 ||||||| ||| | ||||| ||||||| || | ||| || || || ||||| ||||| Sbjct 4604737 GAAGTCGGTATGCAAACCTTCATCTCTGCAAATCAATTCATTAGAGAAGGTTAAACCTGG 4604796 Query 16267 CATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACC 16326 ||| | |||| || |||||||| || || | |||||| || || || ||||| ||||| Sbjct 4604797 CATCATACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAAATACC 4604856 Query 16327 CTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCA 16386 ||||||| ||||| || | |||| ||| | || ||| | | || | ||||| Sbjct 4604857 TTCAACAGCAGCAAAGGCAACCAATCTTTCGCCAAACAAAGCTTGGTCATCATTGATCCA 4604916 Query 16387 TTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAA 16446 | || | |||| || ||||||| || ||||| || ||||| || || |||||||| Sbjct 4604917 TCTCAATGCCCAGTCAGCTTTTTTCTTAATACATGGGATAGTTTCAATAGCATTAAACAA 4604976 Query 16447 TTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGA 16506 || ||| | ||| | ||||| |||||||||| ||| || |||| || Sbjct 4604977 GAATTCAGATTCTTTTGGATCCTTAATATAAGTATCAATCAACAAAGAATAAGTTTCAGA 4605036 Query 16507 GTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTAC 16566 |||||||| || || || || || || ||||| ||| || || | ||| || Sbjct 4605037 ATGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGGACATTGAAC 4605096 Query 16567 TTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAA 16626 ||| | | || ||| ||| ||| || || |||||||||||||| |||||||| || Sbjct 4605097 TTCGGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACGATACCGTCACTAGCAGCAAAGAA 4605156 Query 16627 CGCCAATA-TGTGCTTAATGAAATATTTTTCGTCAG-ATGTAA--GAATATGCCAATCTT 16682 ||||| | | || |||||||||| |||| | || || || | | ||| || | Sbjct 4605157 TGCCAAGACTCTG-GAAATGAAATATCTTTCATTAGCATTCAATCTGTTGTTCCAGTCGT 4605215 Query 16683 TTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTAT 16742 |||||||| | || | |||||| | |||||||| || | ||||| || | Sbjct 4605216 GCAAATCTTTACTCAAGTCAATTTCTTCAGCAGTCCAAAAAGAGGCTTCAGCCTTCTTGT 4605275 Query 16743 ACATTTTCCAAATATCAT 16760 |||||| ||| || |||| Sbjct 4605276 ACATTTGCCAGATTTCAT 4605293 Score = 201 bits (222), Expect = 1e-46 Identities = 487/735 (66%), Gaps = 7/735 (1%) Strand=Plus/Minus Query 15901 AACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAA 15960 |||||| | ||||||||||| || | ||||| |||||||| || || || |||| Sbjct 4056758 AACACCAGCTTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAA 4056699 Query 15961 AGATATATTTTCCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAG 16020 || ||||||||||| |||||||| ||||| || | | | ||| || |||| Sbjct 4056698 TGAGATATTTTCCATGAAATCAAATGGATTGTTAACGTTGTACACCTTCTTGTTACCCAA 4056639 Query 16021 TTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAAT 16080 | | | ||||| || || || || |||| |||||| |||||||| |||||| || Sbjct 4056638 TGACACCAACAATCTGTCAGCAACGAACTCTACATATTGGCACATTAATGTGCAATTCAT 4056579 Query 16081 TCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTC 16140 || | | | || || | || | || ||| | | || ||| || |||| ||||| Sbjct 4056578 ACCCAACAATGAAACTGGCAAGGCATCAGTGAAATACTCTTTTTCAATATCAACTGCTTC 4056519 Query 16141 TTTAATGATATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTT---AGGTGTTTAAACAT 16197 | || || | | | |||| | |||| | |||| | || ||||| Sbjct 4056518 AGTGATAATCT---TTTCAACAATTTCTGCAGGTGGCTTGTTTTCCAAATGGGAAAACAA 4056462 Query 16198 TAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGT 16257 | ||| || ||||| || | ||||| |||||| |||||||||||||| ||||| Sbjct 4056461 CAAACAGGCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTTGGAGAAAGT 4056402 Query 16258 TAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAA 16317 ||||||||||| || | || || |||||||| || | |||||| || || || || Sbjct 4056401 CAACCCTGGCATCAAACCCCTCTTTTTCAACCAGAAGATGGAAGCAAAAGAACCAGAGAA 4056342 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATT 16377 ||| ||||| ||||||| ||||| || | |||| ||| | | ||| || | || Sbjct 4056341 GAAAATACCTTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAATAAAGCCTCATCATC 4056282 Query 16378 ACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGC 16437 |||||| || |||| ||||| ||||| |||||||| || ||||| ||||| Sbjct 4056281 GTTGATCCATCTCAAAGCCCAGTCGGC-TTTTGCTTTATACATGGGATAGTTTCAATGGC 4056223 Query 16438 CTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTA 16497 || || || || ||| | || | || || |||||||| || ||| ||| Sbjct 4056222 ATTGAATAAAAATTCAGATTCTTTTGGGTCCTTGATGTAAGTATCAATTAGCAAAGAGTA 4056163 Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGC 16557 |||| ||||| || || || || || || || ||||| ||| || || || | Sbjct 4056162 AGTTTCAGAGTGAATATTTTCCATCATAATTTGGAAACCATAAAAGAATTTGGCTTCTGG 4056103 Query 16558 TATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGC 16617 ||| ||||| | | || ||| ||| ||| ||||| || ||||| ||||| || Sbjct 4056102 ACATTGCACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAATACCATCACTAGC 4056043 Query 16618 AGCAAAAAACGCCAA 16632 |||||| || ||||| Sbjct 4056042 AGCAAAGAAAGCCAA 4056028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414355251240