Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1 147 2e-30 >seq1 Length=4909981 Score = 147 bits (162), Expect = 2e-30 Identities = 496/765 (65%), Gaps = 47/765 (6%) Strand=Plus/Plus Query 101600 TTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCT--AAGTGTTGGAAACGGTCTAG 101657 |||||||||||||| | ||| ||||| | |||| || | | |||||| ||||| Sbjct 1824527 TTAAAGTCATCAATATTTTCAACTTTTCT-GTTGATCTTCAACTTTGGGAAACT-TCTAG 1824584 Query 101658 GAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTC 101717 | || | | | |||| | | || || || |||||| || | |||||||| | Sbjct 1824585 GCTCTCTCTTGAGCTGCTCCTGCAATGCTTCGATATGATCTTTGTAAACATGAGCATCGC 1824644 Query 101718 CTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACA----TGAGCAATCATGCAA 101773 | ||||| || || ||||| || ||| | || || ||| | ||||||||| Sbjct 1824645 CCATAGTGTGAATGAACTCACC--GCAGTCCAT--GTCACAAACTTCAGCAATCATTTTG 1824700 Query 101774 GTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTT 101833 || || | | ||| |||||| || |||||||| || | ||||||||| |||||| Sbjct 1824701 GTCAACAATGCATAAGAAGCAATATTGAATGGCACCCCAAGTCCCATATCACAGGATCTT 1824760 Query 101834 TGATACAGTTGACAGGAAAG----CTTT------CCATCACAG---------ACATAAAA 101874 ||||||| ||| | || |||| || || | || ||||| Sbjct 1824761 TGATACA----ACAAGCAACTCAACTTTGGTCTGCCTTCTTTGGGGAAATTCACGTAAAA 1824816 Query 101875 TTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGC 101934 ||||| || || || || ||||| || ||||||| |||| |||| | |||||||| Sbjct 1824817 CTGACTAAACACGTGGCATGGCGGTAATGCCATTTTTGGAAAATCTGGAGGGTTCCAAGC 1824876 Query 101935 ACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAA 101994 | |||| | || |||||||| || || ||||| | ||| || | || || Sbjct 1824877 AGACATAATGATTCTTCTATCATATGGATTGGTTTTCAATTTATGGATAACTTGGGCTAG 1824936 Query 101995 TTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATG 102054 ||| |||||||| | || || || || | |||||||||| || || ||||| Sbjct 1824937 TTGATCAACTCCCTGGCCCGAGTAGTCAGTATCACAATCTTTATATTCAGCACCAAAATG 1824996 Query 102055 CCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCAT---AAAAACC 102111 |||||| || ||||||||||| ||||||||||| ||| ||||||| || || || Sbjct 1824997 CCTCCATTGGAATCCATACACCGGTCCAAGATCGCCT---TCTCTGTTATTTGTCAACCC 1825053 Query 102112 AAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGA 102171 || | ||| ||| || ||| || || | |||||||| | || | | || Sbjct 1825054 AATTGAATCCAAATATTCTCTGCTACCGTTGCCTTCCCAAATCTTGACATTTTGTTCGGA 1825113 Query 102172 TAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCT 102231 |||| |||| || || | || |||||||||| | || || | || ||||| Sbjct 1825114 AAGCTTCTTGCCATCGGTGCAGCCCTTGATAAACCAAAGCAACTCCAAGATAATGCCTCT 1825173 Query 102232 CCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAAACTAAACCTAGA 102288 |||| ||| |||| || || || | ||| || |||| |||| ||||| || Sbjct 1825174 GGAAAAGACTTTCTTGGTGGTCAATAATGGGAACTGGTCATCGGCTAAGCTAAATCTGAG 1825233 Query 102289 CT---GTGTTCCAAAAATACTCAGTGTTCCAGTCCCTGTTCTGTC 102330 || ||| |||| ||||| || ||||| || |||||||| Sbjct 1825234 CTGAGGTGGGGCAAATATACTTTTGGTACCAGTGCCAGTTCTGTC 1825278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251169180757