Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq3 123 2e-23 seq4 109 5e-19 seq1 95.1 1e-14 >seq3 Length=2682731 Score = 123 bits (136), Expect = 2e-23 Identities = 167/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 25029 GTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAA 25088 || || |||||||| ||| | ||||| || ||||| || ||||||||| ||| ||| Sbjct 829813 GTCAAGATGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAA 829754 Query 25089 CCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTA 25148 || | || || | | | || |||| || || || ||||||||| | || Sbjct 829753 TCCTCCGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCT 829694 Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208 |||||||||||| | |||||||| || ||||||||||||||| | |||| || | || Sbjct 829693 GATCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGAC 829634 Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||| || ||||||||||| || | ||| |||| || |||| |||| || Sbjct 829633 TACAACATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 829581 >seq4 Length=2685930 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 25044 TTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTG 25103 ||| | ||||| ||||| || |||||||||||| ||| ||| | | || || | Sbjct 2595166 TTCGTTAAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCATT 2595107 Query 25104 GCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTT 25163 | | || |||| || ||| || ||||||||| | || || ||||||||| | Sbjct 2595106 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 2595047 Query 25164 ATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAG 25223 |||||||| || ||||||||||||||| || ||| | | || |||||||| ||||| Sbjct 2595046 ATCTTTGCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAAAAA 2594987 Query 25224 GAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||||||| | || |||| || |||| |||| || Sbjct 2594986 GAATCTACTTTGCATTTGGTCTTGAGATTGAGAGGTGG 2594949 >seq1 Length=4909981 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || || || || |||||||| || ||| ||| | | Sbjct 2135896 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2135837 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | || ||||| || ||| || || |||||| | || ||| ||| Sbjct 2135836 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 2135777 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 |||||| | || ||||| || || |||||||||||| || ||| || | || ||||| Sbjct 2135776 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAAC 2135717 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||| ||||| || | || |||| || |||| |||| || Sbjct 2135716 ATTCAAAAAGAATCCACATTGCATTTGGTTTTGAGATTGAGAGGTGG 2135670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410796764953898