Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq3 114 1e-20 seq1 107 1e-18 >seq3 Length=2682731 Score = 114 bits (126), Expect = 1e-20 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| | || ||||| ||||| ||||||||||| | || ||| ||| ||||||| Sbjct 829599 ACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 829658 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC--GG 18234 |||||||| || ||| |||| | |||||||||||| || | ||||| || || || Sbjct 829659 AATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGG 829718 Query 18235 CAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTT 18294 || | | ||||| | ||| |||||| || ||| ||||| ||| ||| | | Sbjct 829719 ATCTTGGAT--TTGACATTGTCAATAGTGTCGGAGGATTCGACTTCAAGGGTAATGGTCT 829776 Query 18295 TGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 | || || || ||||| || ||||||||||| || Sbjct 829777 TACCCGTTAAGGTTTTAACGAAAATTTGCATCTT 829810 >seq1 Length=4909981 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| || | ||| ||||||||||||||||||||||| | || ||| | | ||||||| Sbjct 2135688 ACCAAATGCAATGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATCTTCC 2135747 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || ||| | || | ||||||||| || || | |||||||| || | Sbjct 2135748 AATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGA 2135807 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||||| | || ||| | |||||| |||| Sbjct 2135808 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTA 2135867 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || || || || ||||| |||||||| Sbjct 2135868 CCAGTTAAGGTCTTGACAAAGATTTGCAT 2135896 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| | ||| ||||||||||| ||||||||||| | || ||| | | ||||||| Sbjct 2135916 ACCAAGTGCAATGTGGATTCTTTTTGGATGTTGTAGTCAGACAAGGTTCTGCCATCTTCC 2135975 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 || || || || ||| | || | ||||||||| || || | |||||||| || | Sbjct 2135976 AACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGA 2136035 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||||| | || ||| | |||||| |||| Sbjct 2136036 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTA 2136095 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || || || || || || |||||||||||| Sbjct 2136096 CCAGTTAAGGTCTTGACGAAAATTTGCATT 2136125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343967637215