Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1 167 5e-36 >seq1 Length=4909981 Score = 167 bits (184), Expect = 5e-36 Identities = 317/461 (69%), Gaps = 18/461 (4%) Strand=Plus/Minus Query 101902 TTTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATT 101961 ||||||| || | | |||||||||||||| |||||||| || ||||| |||| | || Sbjct 4604892 TTTGGCGAAAG-ATTGGTTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCTTT 4604834 Query 101962 CGCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGA 102021 || || || || ||| | || || || ||||| |||| ||| | |||| ||| ||||| Sbjct 4604833 TGCTTCTATCTTTTGGTTAAAAAAGAGAGGTATGATGCCAGGTTTAACCTTCTCTAATGA 4604774 Query 102022 GTTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGG 102081 || |||| || || |||||| | ||| |||||| || ||| || |||| | | Sbjct 4604773 ATTGATTTGCAGAGATGAAGGTTTGCATACCGACTTCGCTTGCTTGTTGTTTTCACA--- 4604717 Query 102082 TTTTG---TTGATACCCCATCAAGAGAAAGGATTCTTGAA---ATTGTCACTGAAGCCGT 102135 ||| | ||| ||||||| ||| ||||| ||| | || || || || Sbjct 4604716 -CTTGCAAAACAAACCAAATCAAGA-----AATTGTTGAAAAGATTATTACCGAGGCTGT 4604663 Query 102136 CCGAATTGAACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTG 102195 | |||||| |||||| | || | | | |||| ||| | |||| |||||| Sbjct 4604662 CACTATTGAAAAAGAATACTTTACCGATGCTTTGCCAGTTTCTCTTTTGGGCATGAACGC 4604603 Query 102196 CAAGTTGATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACT 102255 || |||||| |||| || |||||||||| || || | | | ||||||| |||| | Sbjct 4604602 TAAATTGATGTGCCAATATGTTGAATTTGTTGCTGACAGATTGTTGGTTGCTTTGGG-CA 4604544 Query 102256 AGAA-AAGCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGA 102314 | || ||| || |||||||||||||| ||| || ||||| || ||||| | | Sbjct 4604543 ACAAGAAGGTTTACAATGTTACCAACCCATTCGACTTTATGGAAAACATTTCTTTGGCCG 4604484 Query 102315 ATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355 ||| || ||||| |||||||||||||| |||| || ||| Sbjct 4604483 GTAAAACTAACTTCTTTGAAAAGAGAGTTTCCGACTACCAA 4604443 Score = 161 bits (178), Expect = 2e-34 Identities = 304/443 (69%), Gaps = 13/443 (3%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||||||||| |||||||| || ||||| |||| | || || ||||| |||||| Sbjct 4056312 GTTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCTTTTGCTTCCATCTTCTGG 4056371 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | || || |||||| | |||| || | || | |||||| || | ||||| || || Sbjct 4056372 TTGAAAAAGAGGGGTTTGATGCCAGGGTTGACTTTCTCCAACGAACTTATTTCCAGAGAT 4056431 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 |||||| | || |||||||| || || |||| | ||| | | | ||| Sbjct 4056432 GAAGGTTTGCACACAGACTTTGCCTGTTTGTTGTTTTCCCA---TTTGGAAAACAAGCCA 4056488 Query 102098 TCAAGAGAAAGGATTCTTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154 | ||||| || |||||| || |||||||||| || |||||| |||| | | Sbjct 4056489 CCTGCAGAAA---TTGTTGAAAAGATTATCACTGAAGCAGTTGATATTGAAAAAGAGTAT 4056545 Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214 |||| | | || |||| ||| ||| |||| ||||| |||| || ||| |||| || Sbjct 4056546 TTCACTGATGCCTTGCCAGTTTCATTGTTGGGTATGAATTGCACATTAATGTGCCAATAT 4056605 Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAATG 102272 | || || || || || | | | ||||| | |||| || |||| | || || | Sbjct 4056606 GTAGAGTTCGTTGCTGACAGATTGTTGGTGTCATTGGGTAACAAGAA--GGTGTACAACG 4056663 Query 102273 TTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTG 102332 ||| ||| || || |||||||| ||||| || | | |||||||||||| |||| Sbjct 4056664 TTAACAATCCATTTGATTTCATGGAAAATATCTCATTAGCTGGTAAGACCAACTTCTTTG 4056723 Query 102333 AAAAGAGAGTCGCCGAGTATCAA 102355 ||||||||||| | || || ||| Sbjct 4056724 AAAAGAGAGTCTCTGATTACCAA 4056746 Score = 116 bits (128), Expect = 7e-21 Identities = 297/443 (67%), Gaps = 13/443 (3%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || || |||||||| |||||||| || || ||| ||| | ||||| || || || ||| Sbjct 3917889 GTAGCATTTGCTGCCGTTGAAGGTATATTTTTTTCCGGTTCTTTCGCTTCGATATTTTGG 3917830 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| || ||| || |||| ||||| || | |||||||||||| |||| | | || Sbjct 3917829 CTCAAGAAAAGAGGTCTTATGCCCGGTCTTACTTTCTCCAATGAGTTGATTTGTCGCGAT 3917770 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 |||||||||||| || ||||| || | ||| | | ||| | | | || Sbjct 3917769 GAAGGTCTTCATACTGATTTTGCCTG---TTTATTGTATTCGCATTTGGAAAACAAACC- 3917714 Query 102098 TCAAG-AGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAAT--TT 102154 | | | ||||| || | |||| | || || || || ||||||| ||| | || Sbjct 3917713 TGATGCAGAAATAGTTGATAAAATAATAACAGAGGCGGTTGAAATTGAA-AAGCGTTATT 3917655 Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAA--CTGCAAGTTGATGAGCCAGT 102212 | || | | | ||||| || | |||||||| || || ||||||| |||| Sbjct 3917654 TTGAC-GAAGCATTATCTGTTTCTTTGCTTGGAATGAACGCTTCA--TTGATGAATCAGT 3917598 Query 102213 ACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATG 102272 || |||| |||||||| |||| | ||||| || |||| | ||||| ||| |||| Sbjct 3917597 ACGTTGAGTTTGTGGCTGATAGATTATTGATTTCTTTGGGCAGAAAAAAGATCTACAATG 3917538 Query 102273 TTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTG 102332 |||| || || || || ||||| || ||||| | | || || || || |||| Sbjct 3917537 TTACTAATCCATTTGATTTTATGGAAAACATTTCATTGGCAGGGAAAACTAATTTCTTTG 3917478 Query 102333 AAAAGAGAGTCGCCGAGTATCAA 102355 | || || || | || |||||| Sbjct 3917477 AGAAAAGGGTATCTGATTATCAA 3917455 Score = 98.7 bits (108), Expect = 2e-15 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 35392 AGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGA 35451 ||| || ||| | ||||| || || |||||||||||| | |||||||||||||||||| | Sbjct 1825036 AGAAGGCGATCTTGGACCGGTGTATGGATTCCAATGGAGGCATTTTGGTGCTGAATATAA 1824977 Query 35452 TACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAA---TATAC-TAA 35507 ||| | | || || | || |||| |||||||| | ||| | ||| | ||| Sbjct 1824976 AGATTGTGATACTGACTACTCGGGCCAGGGAGTTGATCAACTAGCCCAAGTTATCCATAA 1824917 Query 35508 AGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGG 35567 | ||| | |||||| |||||||||| || |||||| | || ||||| ||| | Sbjct 1824916 A----TTGAAAACCAATCCATATGATAGAAGAATCATTATGTCTGCTTGGAACCCTCCAG 1824861 Query 35568 ATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTG 35620 || ||| ||||| | || ||||||||| || | ||| ||||| ||| Sbjct 1824860 ATTTTCCAAAAATGGCATTACCGCCATGCCACGTGTTTAGTCAGTTTTACGTG 1824808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583911246685