Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017-
01-05] 7 sequences; 19,653,141 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 7e-24
seq3 104 2e-17
>seq1
Length=4909981
Score = 125 bits (138), Expect = 7e-24
Identities = 264/391 (68%), Gaps = 11/391 (3%)
Strand=Plus/Minus
Query 52564 AAAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGT 52623
||||| | ||| |||||||||| ||||||| | | ||| |||| |||| |||| |
Sbjct 4604940 AAAAAAGCTGACTGGGCATTGAGATGGATCAATGATGACCAAGCTTTGTTTGGCGAAAGA 4604881
Query 52624 CTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTT 52683
|||| || |||||| || |||||| | || || || ||| |||||| | || |||
Sbjct 4604880 TTGGTTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCTTTTGCTTCTATCTTT 4604821
Query 52684 TACATCAAAACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGC 52743
| | |||| || || ||||| || | || || || || ||||| | |
Sbjct 4604820 TGGTTAAAAAAGAGAGGTATGATGCCAGGTTTAACCTTCTCTAATGAATTGATTTGCAGA 4604761
Query 52744 GACGAAGGAATGCACACAGATTTTGCGTGTTTGTA-TTATAATACGCGCGTTAAAGAAAA 52802
|| ||||| |||| || || || || || |||| || | | || || ||| |||
Sbjct 4604760 GATGAAGGTTTGCATACCGACTTCGCTTGCTTGTTGTTTTCACACTTGCA--AAACAAAC 4604703
Query 52803 ATTGTCATATGAAAAAATTCTAGACATGTTTAAA---GAGGCCGTCGACATTGAAAAAGA 52859
|| || || ||||| | || | | ||| ||||| ||| |||||||||||
Sbjct 4604702 -----CAAATCAAGAAATTGTTGAAAAGATTATTACCGAGGCTGTCACTATTGAAAAAGA 4604648
Query 52860 GTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGCATGAACGCGACCATGATGTGCGA 52919
| ||||| || ||||| || || || | |||||||||||||| | |||||||| |
Sbjct 4604647 ATACTTTACCGATGCTTTGCCAGTTTCTCTTTTGGGCATGAACGCTAAATTGATGTGCCA 4604588
Query 52920 GTACATCGAGTTTGTTGCGGACAGACTGTTG 52950
|| | || |||||||| |||||| |||||
Sbjct 4604587 ATATGTTGAATTTGTTGCTGACAGATTGTTG 4604557
>seq3
Length=2682731
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | ||| || ||||| | || || || ||||| ||||| || || |
Sbjct 829581 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 829640
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || ||||| | |||||||||||| |||||| | ||| ||||| || ||
Sbjct 829641 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGA 829700
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| ||||||||||| ||| || ||| | | || | ||||||| || || ||
Sbjct 829701 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACT 829760
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||| ||| | ||||| || || || ||||| ||||| ||||||||
Sbjct 829761 TCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCAT 829807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063956594400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |