Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1 318 6e-82 >seq1 Length=4909981 Score = 318 bits (352), Expect = 6e-82 Identities = 604/881 (69%), Gaps = 15/881 (2%) Strand=Plus/Plus Query 13563 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13622 |||| ||||| || ||||| || || |||||| ||||||||||||||||||||| Sbjct 4604423 TTAGCCATAACACCAGCCTTTTGGTAGTCGGAAACTCTCTTTTCAAAGAAGTTAGTTTTA 4604482 Query 13623 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATC 13681 || ||| || || ||||||||||| || ||||| || | |||| | || || | Sbjct 4604483 CCGGCCAAAGAAATGTTTTCCATAAAGTCGAATGGGTTGGTA-ACATTGTAAACCTTCTT 4604541 Query 13682 ACAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13741 || | | | | ||||| ||||||| ||| |||| |||||| |||| || | Sbjct 4604542 GTTGCCCAAAGCAACCAACAATCTGTCAGCAACAAATTCAACATATTGGCACATCAATTT 4604601 Query 13742 ACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGA 13801 | ||||| || | || || || | || ||| || |||||||||| |||| Sbjct 4604602 AGCGTTCATGCCCAAAAGAGAAACTGGCAAAGCATCGGTAAAGTATTCTTTTTCAATAGT 4604661 Query 13802 CACAGCCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTT 13861 |||||||| | ||||| || || ||| || | | || | || | ||| Sbjct 4604662 GACAGCCTCGGTAATAATCTTTTCAACAATTTCTTGATTTGGTTTGTTTTGCAAGTGTGA 4604721 Query 13862 AAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGA 13921 ||| | || || || || || ||| | || |||||||| | ||| | ||| || || Sbjct 4604722 AAACAACAAGCAAGCGAAGTCGGTATGCAAACCTTCATCTCTGCAAATCAATTCATTAGA 4604781 Query 13922 AAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCC 13981 || ||||| |||||||||| |||| |||||||||||||| || | |||||| || || Sbjct 4604782 GAAGGTTAAACCTGGCATCATACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAAGAACC 4604841 Query 13982 GGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTT 14041 || ||||| || || ||||| |||||||| || | |||| ||| |||||| | |||| Sbjct 4604842 AGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACCAATCTTTCGCCAAACAAAGCTTG 4604901 Query 14042 TTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTC 14101 | | |||||| | ||||| |||| |||||| |||||| | || ||||| Sbjct 4604902 GTCATCATTGATCCATCTCAATGCCCAGTCAGCTTTTTTCTTAATACATGGGATAGTTTC 4604961 Query 14102 AATAGCATTAAATAAATATTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGT 14159 |||||||||||| || |||| |||| || | ||| ||| || |||||||| | Sbjct 4604962 AATAGCATTAAACAAGAATTCAGATTCTTTTGGATCCTT--AATATAAGTATCAATCAAC 4605019 Query 14160 AAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTA 14219 || ||| ||||||| |||||||||||||| || || ||||| || || ||| | Sbjct 4605020 AAAGAATAAGTTTCAGAATGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTG 4605079 Query 14220 GCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCA 14279 ||||| | ||||| ||||| | | || |||| |||| ||||| ||||| ||||| Sbjct 4605080 GCTTCTGGACATTGAACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACGATACCG 4605139 Query 14280 TCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT---GTTG 14336 |||||||| ||||| |||||||| | | ||| || ||| || |||||| || Sbjct 4605140 TCACTAGCAGCAAAGAATGCCAAGACTCTGGAAATGAAATAT--CT-TTCATTAGCATTC 4605196 Query 14337 AGT---TTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAA 14393 | | || ||||| ||| ||||| ||| | || | ||| ||| | ||||||||| Sbjct 4605197 AATCTGTTGTTCCAGTCGTGCAAATCTTTACTCAAGTCAATTTCTTCAGCAGTCCAAAAA 4605256 Query 14394 CTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATA 14434 || |||| || || |||||| ||| ||||| | ||| Sbjct 4605257 GAGGCTTCAGCCTTCTTGTACATTTGCCAGATTTCATGATA 4605297 Score = 311 bits (344), Expect = 8e-80 Identities = 523/747 (70%), Gaps = 15/747 (2%) Strand=Plus/Minus Query 13563 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13622 |||| ||||| || |||||| || ||| ||||| |||||||||||||| || ||| Sbjct 4056766 TTAGCCATAACACCAGCTTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTA 4056707 Query 13623 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATC 13681 || | | ||| ||||||||||| |||||||||||||| || || | |||| || | Sbjct 4056706 CCAGCTAATGAGATATTTTCCATGAAATCAAATGGATTG-TTAACGTTGTACACCTTCTT 4056648 Query 13682 ACAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13741 ||| | | | | ||||| ||||||| ||||| | |||||| ||||||| Sbjct 4056647 GTTACCCAATGACACCAACAATCTGTCAGCAACGAACTCTACATATTGGCACATTAATGT 4056588 Query 13742 ACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGA 13801 ||||||||||| | | | || || | || || ||| | |||||||| ||| Sbjct 4056587 GCAATTCATACCCAACAATGAAACTGGCAAGGCATCAGTGAAATACTCTTTTTCAATATC 4056528 Query 13802 CACAGCCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTT---AGATG 13858 || || || | ||||| || || ||| || | ||| || | ||| | ||| Sbjct 4056527 AACTGCTTCAGTGATAATCTTTTCAACAATTTCT---GCAGGTGGCTTGTTTTCCAAATG 4056471 Query 13859 TTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTT 13918 ||| | ||||| ||||| || || | || |||||||| |||||||||||| Sbjct 4056470 GGAAAACAACAAACAGGCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTT 4056411 Query 13919 TGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGA 13978 || || || || ||||||||||| || | ||||| ||||| || || | |||||| || Sbjct 4056410 GGAGAAAGTCAACCCTGGCATCAAACCCCTCTTTTTCAACCAGAAGATGGAAGCAAAAGA 4056351 Query 13979 CCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGC 14038 || || ||||| || || ||||| |||||||| || | |||| ||| ||||| | || Sbjct 4056350 ACCAGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAATAAAGC 4056291 Query 14039 TTTTTTGTTCGAT-ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTG 14097 | | | || | |||||| | |||||| || | |||| |||| || | || | Sbjct 4056290 CTCATCAT-CGTTGATCCATCTCAAAGCCCAGTCGGCTTTTGCTTTA-TACATGGGATAG 4056233 Query 14098 TTTCAATAGCATTAAATAAATATTCC--TTCTCTTTAGTACTTGAAATGTATGTATCAAT 14155 ||||||| ||||| |||||| |||| |||| || || ||||| |||| |||||||| Sbjct 4056232 TTTCAATGGCATTGAATAAAAATTCAGATTCTTTTGGGTCCTTGA--TGTAAGTATCAAT 4056175 Query 14156 AAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCA 14215 || || || |||||||||| || |||||||| || || |||||||||||| | Sbjct 4056174 TAGCAAAGAGTAAGTTTCAGAGTGAATATTTTCCATCATAATTTGGAAACCATAAAAGAA 4056115 Query 14216 TCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTAT 14275 | | ||||| | ||||| ||||| | | || |||| |||| |||||||| || || Sbjct 4056114 TTTGGCTTCTGGACATTGCACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAAT 4056055 Query 14276 ACCATCACTAGCTGCAAAAAATGCCAA 14302 |||||||||||| ||||| || ||||| Sbjct 4056054 ACCATCACTAGCAGCAAAGAAAGCCAA 4056028 Score = 250 bits (276), Expect = 2e-61 Identities = 603/895 (67%), Gaps = 37/895 (4%) Strand=Plus/Plus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 |||||||| ||| || ||||| |||||||| |||||||| ||| ||| ||| || ||| Sbjct 3917453 TTTTGATAATCAGATACCCTTTTCTCAAAGAAATTAGTTTTCCCTGCCAATGAAATGTTT 3917512 Query 13641 TCCATAAAATCAAATGGATTTATTGACAT---AAACACTTTATCACAACCTAGTTCTAAT 13697 |||||||||||||||||||| | | |||| | | ||| || | || ||| Sbjct 3917513 TCCATAAAATCAAATGGATT-AGTAACATTGTAGATCTTTTTTCTGCCCAAAGA---AAT 3917568 Query 13698 -AGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTAT 13756 | |||||||||||| | |||||||| || ||| ||| || | ||||| || | Sbjct 3917569 CAATAATCTATCAGCCACAAACTCAACGTACTGATTCATCAATGAAGCGTTCATTCCAAG 3917628 Query 13757 TAGTTTTACAGGAATTATA-TTGGTTAAAAATTCT-TTTTCTATAGACACAGCCTCTTTT 13814 | |||| || || || || |||| | ||||| || || |||||| || Sbjct 3917629 CAAAGAAACAG--ATAATGCTTCGTCAAAATAACGCTTTTCAATTTCAACCGCCTCTGTT 3917686 Query 13815 ATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACAC 13874 || || | || || || | ||| | || | ||| | | | |||||| Sbjct 3917687 ATTATTTTATCAACTATTTCTGCATCAGGTTTGTTTTCCAAATGCGAATACAATAAACAG 3917746 Query 13875 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 13934 ||||||||| |||||| || ||||| | || ||| | || || || || || | || Sbjct 3917747 GCAAAATCAGTATGAAGACCTTCATCGCGACAAATCAACTCATTGGAGAAAGTAAGACCG 3917806 Query 13935 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATT 13994 ||||| | |||| ||| || | ||||||||| | ||| || || |||||||| ||||| Sbjct 3917807 GGCATAAGACCTCTTTTCTTGAGCCAAAATATCGAAGCGAAAGAACCGGAAAAAAATATA 3917866 Query 13995 CCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTT--TGTTCGATA 14052 || ||||| |||||||| |||| ||||| ||| |||| | || | || | ||| || Sbjct 3917867 CCTTCAACGGCAGCAAATGCTACTAATCTTTCAGCAAATAAAGCGTCTTCATCTTCAAT- 3917925 Query 14053 TCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAA 14112 |||| | ||||| || | ||||| |||||| | ||||| ||||| ||||||| Sbjct 3917926 -CCATCTAAGCGCCCAGTCTGCTTTTTCTTTAATGCATGGAATTGTATCAATTGCATTAA 3917984 Query 14113 ATAAATATTCCTTCTCTTTAGTA-CTTGAA---ATGTATGTATCAATAAGTAAGCTATAC 14168 ||||| |||| || || || | | ||| | |||| |||||| || || || Sbjct 3917985 ATAAAAATTCGGCCTGTTCAGGATCCAGAATATAAGTATCTATCAA-CAGAGAG---TAT 3918040 Query 14169 ATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGAC 14228 | || || || | || ||||| ||| |||||||||||||||||| | ||||| | Sbjct 3918041 GTCTCTGAATGAACATTCTCCATCATTATTTGAAAACCATAAAAGCATTTGGCTTCGGGA 3918100 Query 14229 CATTGTACTTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14287 ||||||| | || |||| | | | | ||| |||||||| || ||||| || Sbjct 3918101 ATCTGTACTTGGGTAGAGAAAT-TCTGTACAAGATTCTCATTAACGATGCCATCCGATGC 3918159 Query 14288 TGCAAAAAATGC---CAATATGTTTTTAATAAAGT----ATTGCTCTTCATTGTTGAGTT 14340 ||||||||||| || | || | | ||| | |||||| |||| | || Sbjct 3918160 GGCAAAAAATGCTAGCACTCTGGAAATGAAAAACTGTTCATTGCTATTCAACTTATAG-- 3918217 Query 14341 TTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGA 14400 |||||||| ||||||||| |||||| | ||| || | ||||| ||| ||| Sbjct 3918218 --TTCCAATCATGCAAATCCTTACCAAGATCAATTTCCTCGGCGGTCCAGAAAGAAGCTT 3918275 Query 14401 CAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14455 | |||||||| |||||| ||||||||| | || ||| ||||| | |||||| Sbjct 3918276 CTGCTTTTTTGTACATTTGCCATATTTCATGGTACTTTATGGGAAATAATACAAA 3918330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727958023800