Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq1 307 1e-78 >seq1 Length=4909981 Score = 307 bits (340), Expect = 1e-78 Identities = 604/883 (68%), Gaps = 19/883 (2%) Strand=Plus/Plus Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410 |||| ||||| || ||||| || || |||||| |||||||| |||||||||||| Sbjct 4604423 TTAGCCATAACACCAGCCTTTTGGTAGTCGGAAACTCTCTTTTCAAAGAAGTTAGTTTTA 4604482 Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATC 13469 || ||| || || ||||||||||| |||||||| || || |||| | || || | Sbjct 4604483 CCGGCCAAAGAAATGTTTTCCATAAAGTCGAATGGGTTGGTA-ACATTGTAAACCTTCTT 4604541 Query 13470 ACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13529 || | | | || ||||| ||||||| ||| |||| |||||| |||| || | Sbjct 4604542 GTTGCCCAAAGCAACCAACAATCTGTCAGCAACAAATTCAACATATTGGCACATCAATTT 4604601 Query 13530 ACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGA 13589 | ||||| || | || || || | || || || |||||||||| |||| Sbjct 4604602 AGCGTTCATGCCCAAAAGAGAAACTGGCAAAGCATCGGTAAAGTATTCTTTTTCAATAGT 4604661 Query 13590 CACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTT 13649 ||||||||| | ||||| | | || ||| || | | || | || | ||| Sbjct 4604662 GACAGCCTCGGTAATAATCTTTTCAACAATTTCTTGATTTGGTTTGTTTTGCAAGTGTGA 4604721 Query 13650 AAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGA 13709 ||| | || || || || || ||| | || |||||||| | ||| | ||| || || Sbjct 4604722 AAACAACAAGCAAGCGAAGTCGGTATGCAAACCTTCATCTCTGCAAATCAATTCATTAGA 4604781 Query 13710 AAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCC 13769 || ||||| |||||||||| |||| |||||||||||||| || | ||| || || || Sbjct 4604782 GAAGGTTAAACCTGGCATCATACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAAGAACC 4604841 Query 13770 GGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTT 13829 || ||||| || || ||||| |||||||| || | | || ||| |||||| | |||| Sbjct 4604842 AGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACCAATCTTTCGCCAAACAAAGCTTG 4604901 Query 13830 TTTGT--TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT 13887 | | ||||| |||| | ||||| |||| |||||| |||||| | || ||| Sbjct 4604902 GTCATCATTGAT--CCATCTCAATGCCCAGTCAGCTTTTTTCTTAATACATGGGATAGTT 4604959 Query 13888 TCGATTGCATTGAATAAATGTTCCTTCTCTTTAGTA--CTTGAAATGTATGTATCAATAA 13945 || || ||||| || || ||| ||||| | | ||| ||| || |||||||| | Sbjct 4604960 TCAATAGCATTAAACAAGAATTCAGATTCTTTTGGATCCTT--AATATAAGTATCAATCA 4605017 Query 13946 GTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATC 14005 || ||| ||||||| ||||||||||| || || || ||||| || |||||| Sbjct 4605018 ACAAAGAATAAGTTTCAGAATGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATT 4605077 Query 14006 TAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATAC 14065 | ||||||| ||||| || || | | || |||| |||||||||| ||||| |||| Sbjct 4605078 TGGCTTCTGGACATTGAACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACGATAC 4605137 Query 14066 CATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT---GT 14122 | |||||||| ||||| |||||||| | | ||| || ||| || |||||| | Sbjct 4605138 CGTCACTAGCAGCAAAGAATGCCAAGACTCTGGAAATGAAATAT--CT-TTCATTAGCAT 4605194 Query 14123 TGAGT---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAA 14179 | | | || ||||| ||| ||||| ||| | || | ||| ||| | ||||||| Sbjct 4605195 TCAATCTGTTGTTCCAGTCGTGCAAATCTTTACTCAAGTCAATTTCTTCAGCAGTCCAAA 4605254 Query 14180 AACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATA 14222 || || |||| || || |||||| ||| ||||| | ||| Sbjct 4605255 AAGAGGCTTCAGCCTTCTTGTACATTTGCCAGATTTCATGATA 4605297 Score = 300 bits (332), Expect = 2e-76 Identities = 521/748 (70%), Gaps = 17/748 (2%) Strand=Plus/Minus Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410 |||| ||||| || |||||| || ||| ||||| |||||||| ||||| || ||| Sbjct 4056766 TTAGCCATAACACCAGCTTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTA 4056707 Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATC 13469 || | | ||| ||||||||||| ||||| |||||||| ||| || | |||| || | Sbjct 4056706 CCAGCTAATGAGATATTTTCCATGAAATCAAATGGATT-GTTAACGTTGTACACCTTCTT 4056648 Query 13470 ACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13529 ||| | | | || ||||| ||||||| ||||| | |||||| ||||||| Sbjct 4056647 GTTACCCAATGACACCAACAATCTGTCAGCAACGAACTCTACATATTGGCACATTAATGT 4056588 Query 13530 ACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGA 13589 ||||||||||| | | | || || | || ||| ||| | |||||||| ||| Sbjct 4056587 GCAATTCATACCCAACAATGAAACTGGCAAGGCATCAGTGAAATACTCTTTTTCAATATC 4056528 Query 13590 CACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTT---AGATG 13646 || || || | ||||| | | || ||| || | ||| || | ||| | ||| Sbjct 4056527 AACTGCTTCAGTGATAATCTTTTCAACAATTTCT---GCAGGTGGCTTGTTTTCCAAATG 4056471 Query 13647 TTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTT 13706 ||| | ||||| ||||| || || | || |||||||| |||||||||||| Sbjct 4056470 GGAAAACAACAAACAGGCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTT 4056411 Query 13707 TGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGA 13766 || || || || ||||||||||| || | ||||| ||||| || || | ||| || || Sbjct 4056410 GGAGAAAGTCAACCCTGGCATCAAACCCCTCTTTTTCAACCAGAAGATGGAAGCAAAAGA 4056351 Query 13767 TCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGC 13826 || || ||||| || || ||||| |||||||| || | | || ||| ||||| | || Sbjct 4056350 ACCAGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAATAAAGC 4056291 Query 13827 TTTTTTGT--TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATT 13884 | | | ||||| |||| | |||||| || | |||| |||| || | || Sbjct 4056290 CTCATCATCGTTGAT--CCATCTCAAAGCCCAGTCGGCTTTTGCTTTA-TACATGGGATA 4056234 Query 13885 GTTTCGATTGCATTGAATAAATGTTCC--TTCTCTTTAGTACTTGAAATGTATGTATCAA 13942 ||||| || |||||||||||| ||| |||| || || ||||| |||| ||||||| Sbjct 4056233 GTTTCAATGGCATTGAATAAAAATTCAGATTCTTTTGGGTCCTTGA--TGTAAGTATCAA 4056176 Query 13943 TAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAAC 14002 | || || || |||||||||| || ||||| || || || ||||||||||| Sbjct 4056175 TTAGCAAAGAGTAAGTTTCAGAGTGAATATTTTCCATCATAATTTGGAAACCATAAAAGA 4056116 Query 14003 ATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAA 14062 || | ||||||| ||||| || || | | || |||| ||||||||||||| |||| Sbjct 4056115 ATTTGGCTTCTGGACATTGCACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAA 4056056 Query 14063 TACCATCACTAGCTGCAAAAAATGCCAA 14090 ||||||||||||| ||||| || ||||| Sbjct 4056055 TACCATCACTAGCAGCAAAGAAAGCCAA 4056028 Score = 228 bits (252), Expect = 8e-55 Identities = 597/894 (67%), Gaps = 35/894 (4%) Strand=Plus/Plus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 |||||||| ||| || ||||| ||||| || |||||||| ||| ||| ||| || ||| Sbjct 3917453 TTTTGATAATCAGATACCCTTTTCTCAAAGAAATTAGTTTTCCCTGCCAATGAAATGTTT 3917512 Query 13429 TCCATAAAATCGAATGGATTTGTTGACAT---AAACACTTTATCACAACCTAGTTCTAAT 13485 ||||||||||| |||||||| || |||| | | ||| || | || ||| Sbjct 3917513 TCCATAAAATCAAATGGATTAGTA-ACATTGTAGATCTTTTTTCTGCCCAAAGA---AAT 3917568 Query 13486 -AATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTAT 13544 |||||||||||||| | |||||||| || ||| ||| || | ||||| || | Sbjct 3917569 CAATAATCTATCAGCCACAAACTCAACGTACTGATTCATCAATGAAGCGTTCATTCCAAG 3917628 Query 13545 TAGTTTTACAGGAATTATA-TTAGTTAAAAATTCT-TTTTCTATAGACACAGCCTCGTTT 13602 | |||| || || || || |||| | ||||| || || ||||| || Sbjct 3917629 CAAAGAAACAG--ATAATGCTTCGTCAAAATAACGCTTTTCAATTTCAACCGCCTCTGTT 3917686 Query 13603 ATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACAC 13662 || || | | || || || | ||| | || | ||| | | | |||||| Sbjct 3917687 ATTATTTTATCAACTATTTCTGCATCAGGTTTGTTTTCCAAATGCGAATACAATAAACAG 3917746 Query 13663 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 13722 ||||||||| |||||| || ||||| | || ||| | || || || || || | || Sbjct 3917747 GCAAAATCAGTATGAAGACCTTCATCGCGACAAATCAACTCATTGGAGAAAGTAAGACCG 3917806 Query 13723 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATT 13782 ||||| | |||| ||| || | ||||||||| | |||||| || |||||||| ||||| Sbjct 3917807 GGCATAAGACCTCTTTTCTTGAGCCAAAATATCGAAGCGAAAGAACCGGAAAAAAATATA 3917866 Query 13783 CCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATC 13842 || ||||| |||||||| |||| || || ||| |||| | || | || | | ||| Sbjct 3917867 CCTTCAACGGCAGCAAATGCTACTAATCTTTCAGCAAATAAAGCGTCTTCATCTTCAATC 3917926 Query 13843 CATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAAT 13902 ||| | ||||| || | ||||| |||||| | ||||| || |||||||| ||| Sbjct 3917927 CATCTAAGCGCCCAGTCTGCTTTTTCTTTAATGCATGGAATTGTATCAATTGCATTAAAT 3917986 Query 13903 AAATGTTCCTTCTCTTTAGTA-CTTGAA---ATGTATGTATCAATAAGTAAGCTATACAT 13958 ||| ||| || || || | | ||| | |||| |||||| | | || || | Sbjct 3917987 AAAAATTCGGCCTGTTCAGGATCCAGAATATAAGTATCTATCAACA-GAGAG---TATGT 3918042 Query 13959 TTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCA 14018 || || || | || || || ||| |||||||||||||| ||| | ||||| | Sbjct 3918043 CTCTGAATGAACATTCTCCATCATTATTTGAAAACCATAAAAGCATTTGGCTTCGGGAAT 3918102 Query 14019 TTGTACCTCCGAGTAAAATCTTTCTG-CCAAG-TTTTCATTAACAATACCATCACTAGCT 14076 ||||| | | ||| | ||||| |||| || |||||||| || ||||| || Sbjct 3918103 CTGTACTT--GGGTAGAGAAATTCTGTACAAGATTCTCATTAACGATGCCATCCGATGCG 3918160 Query 14077 GCAAAAAATGC---CAATATGTTTTTAATAAAGT----ATTGCTCTTCATTGTTGAGTTT 14129 ||||||||||| || | || | | ||| | |||||| |||| | || Sbjct 3918161 GCAAAAAATGCTAGCACTCTGGAAATGAAAAACTGTTCATTGCTATTCAACTTATAG--- 3918217 Query 14130 TTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGAC 14189 |||||||| ||||||||| |||||| | ||| || | ||||| ||| ||| | Sbjct 3918218 -TTCCAATCATGCAAATCCTTACCAAGATCAATTTCCTCGGCGGTCCAGAAAGAAGCTTC 3918276 Query 14190 AGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14243 |||||||| |||||| ||||||||| | || ||| ||||| | |||||| Sbjct 3918277 TGCTTTTTTGTACATTTGCCATATTTCATGGTACTTTATGGGAAATAATACAAA 3918330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588758123480