Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017-
01-05] 7 sequences; 19,653,141 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq3 107 2e-18
seq1 102 8e-17
seq4 91.5 1e-13
>seq3
Length=2682731
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| || | ||| || || || | || ||||| ||||| |||||||| || |
Sbjct 829581 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 829640
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | ||||||||||||| |||||| | ||| ||||| || ||
Sbjct 829641 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGA 829700
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| || || ||| | | || | ||||| | || ||| |||
Sbjct 829701 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACT 829760
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|||| || | ||||| || || || ||||| ||||| ||||||||
Sbjct 829761 TCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCAT 829807
>seq1
Length=4909981
Score = 102 bits (112), Expect = 8e-17
Identities = 318/484 (66%), Gaps = 9/484 (2%)
Strand=Plus/Minus
Query 50359 AAAAAGGACGATTGGGCATTGAAATGGACTaaaaacaaaaaa-CTTACTTTGGCCGAACG 50417
||||| | || |||||||||| ||||| || | | || ||| |||||| ||| |
Sbjct 4604940 AAAAAAGCTGACTGGGCATTGAGATGGATCAATGATGACCAAGCTTTGTTTGGC-GAAAG 4604882
Query 50418 TTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATT 50477
|| || || ||||| ||||||||| | || || || ||| ||||| | || ||
Sbjct 4604881 ATTGGTTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCTTTTGCTTCTATCTT 4604822
Query 50478 TTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCG 50537
|| | |||| ||| || ||||| || | || || || || ||||||| |
Sbjct 4604821 TTGGTTAAAAAAGAGAGGTATGATGCCAGGTTTAACCTTCTCTAATGAATTGATTTGCAG 4604762
Query 50538 CGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAA 50597
|| ||||| |||| || ||||| || || |||| | || | | ||| |||
Sbjct 4604761 AGATGAAGGTTTGCATACCGACTTCGCTTGCTTGTTGTTTTC-ACACTTGCAAAACAAAC 4604703
Query 50598 ATTATCATACGAAACAATTTTGGACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTT 50657
|||| |||| || | || | | || || ||| || |||||||| |
Sbjct 4604702 CAAATCAA--GAAATTGTTGAAAAGATTATTACCGAGGCTGTCACTATTGAAAAAGAATA 4604645
Query 50658 TTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTA 50717
|| || || ||||| || || | | |||||||||||||| | |||||||| | ||
Sbjct 4604644 CTTTACCGATGCTTTGCCAGTTTCTCTTTTGGGCATGAACGCTAAATTGATGTGCCAATA 4604585
Query 50718 CATTGAGTTTGTTGCAGACAGATTGTT-GTTGCAGCTGGGACAAC-CGAAATACTATAAT 50775
|||| |||||||| ||||||||||| ||||| | || |||| ||| || |||
Sbjct 4604584 TGTTGAATTTGTTGCTGACAGATTGTTGGTTGC--TTTGGGCAACAAGAAGGTTTACAAT 4604527
Query 50776 GCACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTC 50835
| ||||| || |||||| | ||||| || |||| || ||||| ||||| ||
Sbjct 4604526 GTTACCAACCCATTCGACTTTATGGAAAACATTTCTTTGGCCGGTAAAACTAACTTCTTT 4604467
Query 50836 GAAA 50839
||||
Sbjct 4604466 GAAA 4604463
Score = 93.3 bits (102), Expect = 4e-14
Identities = 262/394 (66%), Gaps = 15/394 (4%)
Strand=Plus/Plus
Query 50361 AAAGGACGATTGGGCATTGAAATGGACTaaaaacaaaaaa-CTTACTTTGGCCGAACGTT 50419
||| | ||| ||||| |||| ||||| || | | | ||| ||||| ||| | |
Sbjct 4056251 AAAAGCCGACTGGGCTTTGAGATGGATCAACGATGATGAGGCTTTATTTGGT-GAAAGAT 4056309
Query 50420 TAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTT 50479
| || || ||||| ||||||||| | || || || ||| ||||| |||| || |
Sbjct 4056310 TGGTTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCTTTTGCTTCCATCTTCT 4056369
Query 50480 ACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCG 50539
| |||| || | ||||| || | || || |||||| | ||||| | |
Sbjct 4056370 GGTTGAAAAAGAGGGGTTTGATGCCAGGGTTGACTTTCTCCAACGAACTTATTTCCAGAG 4056429
Query 50540 ACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAAT 50599
| ||||| |||||||||||||||| ||||||| | | | | | || ||||
Sbjct 4056430 ATGAAGGTTTGCACACAGACTTTGCCTGTTTGTTGTT---TTCCC----ATTTGGAAAAC 4056482
Query 50600 TATCATAC-GAAACAATTTTGGACATGTT---CAAAGAAGCCGTCGACATCGAAAAAGAG 50655
| | | | | |||| | || | | | || ||||| || || || |||||||||
Sbjct 4056483 AAGCCACCTGCAGAAATTGTTGAAAAGATTATCACTGAAGCAGTTGATATTGAAAAAGAG 4056542
Query 50656 TTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAAC-GCAGACATGATGTGCGA 50714
| |||||| || || || || || |||||||||| ||||| ||| | | |||||| |
Sbjct 4056543 TATTTCACTGATGCCTTGCCAGTTTCATTGTTGGGTATGAATTGCACAT-TAATGTGCCA 4056601
Query 50715 GTACATTGAGTTTGTTGCAGACAGATTGTTGTTG 50748
|| | ||||| ||||| |||||||||||| ||
Sbjct 4056602 ATATGTAGAGTTCGTTGCTGACAGATTGTTGGTG 4056635
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| || | |||||| ||||| | ||| ||||||||||| |||||||| || |
Sbjct 2135670 CCACCTCTCAATCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATGTTGTAGTCAGAC 2135729
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | ||| ||||||||| | |||| | ||| || || || ||
Sbjct 2135730 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2135789
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| ||||| ||| || || | | || | ||||| | | ||| |||
Sbjct 2135790 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 2135849
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | || || || || || || || || || |||||||||
Sbjct 2135850 TCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCATA 2135897
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| || | |||||| || || | ||| ||||||||||| |||||||| || |
Sbjct 2135898 CCACCTCTCAATCTCAAAACCAAGTGCAATGTGGATTCTTTTTGGATGTTGTAGTCAGAC 2135957
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | || ||||||||| | |||| | ||| || || || ||
Sbjct 2135958 AAGGTTCTGCCATCTTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2136017
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| ||||| ||| || || | | || | ||||| | | ||| |||
Sbjct 2136018 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 2136077
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | ||| | || || || || || || || ||||| ||||||||
Sbjct 2136078 TCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 2136124
>seq4
Length=2685930
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| || | ||| || ||||| | |||||||||||||| || ||||| ||
Sbjct 2594949 CCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAA 2595008
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | ||||||||||||| |||||| | ||| || || || ||
Sbjct 2595009 AGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 2595068
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| ||| || ||| | | || | ||||| | | ||| |||
Sbjct 2595069 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACT 2595128
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 143175
|| | || | || || || ||||| ||||| |||||
Sbjct 2595129 TCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAACGAA 2595166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507014355636240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |