Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1 174 2e-38 seq2 98.7 1e-15 >seq1 Length=4909981 Score = 174 bits (192), Expect = 2e-38 Identities = 459/689 (67%), Gaps = 25/689 (4%) Strand=Plus/Minus Query 69902 TTGACGACCAAGACTGTCTTTGTCAAGGGCGTCATCGAGGAGCTCTTGTGGATGATTTCC 69961 ||||| ||||||| |||||| || ||| | ||| |||| | | ||| | || Sbjct 1825197 TTGACCACCAAGAAAGTCTTTTCCAGAGGCATTATCTTGGAGTTGCTTTGGTTTATCAAG 1825138 Query 69962 GGATCGACCAATGCCAAAGAGCTGAGCCGAA-AGGGTGTACACATTTGGAGCGGCAACAG 70020 || | ||| ||| ||| |||| ||||| | ||| | |||||| |||||| | Sbjct 1825137 GGCTGCACCGATGGCAAGAAGCTTT-CCGAACAAAATGTCAAGATTTGGGAAGGCAACGG 1825079 Query 70021 TAGTCGAAGCGTTTTGGATTCGCTCGGCTTCACCGACAGACA-AGAGGGCGATCTGGGGC 70079 ||| || ||||||||| | || || || | | ||| ||| |||||||| || | Sbjct 1825078 TAGCAGAGAATATTTGGATTCAATTGGGTTGACAAATA-ACAGAGAAGGCGATCTTGGAC 1825020 Query 70080 CAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGACAGACT 70139 | ||||| |||||||| |||||||| | || | | ||| ||| || || || |||| Sbjct 1825019 CGGTGTATGGATTCCAATGGAGGCATTTTGGTGCTGAATATAAAGATTGTGATACTGACT 1824960 Query 70140 ATTCGGGTCAGGGTGTTGATCAATT-GCAGACAATCATTGACACTCTCAAGACCAATCCA 70198 | ||||| ||||| ||||||||| | || | | | || | | | || ||||||||| Sbjct 1824959 ACTCGGGCCAGGGAGTTGATCAACTAGCCCA-AGTTATCCATAAATTGAAAACCAATCCA 1824901 Query 70199 ACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTA 70258 ||||| || ||| | |||| | ||||| ||| ||||||| | |||||||| || Sbjct 1824900 TATGATAGAAGAATCATTATGTCTGCTTGGAACCCTCCAGATTTTCCAAAAATGGCATTA 1824841 Query 70259 CCACCGTGTCAC-TGTTTGGCTCAGTTTTACTCGTAC---------GATGGCAAA----- 70303 || || || ||| ||||| | |||||||||| | | || |||| | Sbjct 1824840 CCGCCATGCCACGTGTTTAG-TCAGTTTTACGTGAATTTCCCCAAAGAAGGCAGACCAAA 1824782 Query 70304 -TTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACAT 70362 ||| ||||| ||||||| || || ||||| || || || || || || || Sbjct 1824781 GTTGAGTTGCTTGTTGTATCAAAGATCCTGTGATATGGGACTTGGGGTGCCATTCAATAT 1824722 Query 70363 TGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAA-GCGCACG 70421 ||| ||| | ||||||| | ||||||||| | || | | || | ||| | Sbjct 1824721 TGCTTCTTATGCATTGTTGACCAAAATGATTGCTGAAGTTTGTGACATGGACTGCGGT-G 1824663 Query 70422 AGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGG 70481 ||||| | ||||| || ||||| ||||| || || | |||| ||||| |||| ||| Sbjct 1824662 AGTTCATTCACACTATGGGCGATGCTCATGTTTACAAAGATCATATCGAAGCATTGCAGG 1824603 Query 70482 TGCAACTCGAACGGGAGCCGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAAAGTTGAAA 70541 ||| ||| | | ||||| ||| ||| || ||| || || | | |||||||||| Sbjct 1824602 AGCAGCTCAAGAGAGAGCCTAGAAGTTTCCCAAAGTTGAAGATCAACAGAAAAGTTGAAA 1824543 Query 70542 ATATTGACAGTTTTAAGTACGAAGATTTT 70570 ||||||| ||||||| || |||||| Sbjct 1824542 ATATTGATGACTTTAAGTTTGATGATTTT 1824514 Score = 145 bits (160), Expect = 1e-29 Identities = 360/535 (67%), Gaps = 10/535 (2%) Strand=Plus/Minus Query 124986 AGATTTACCCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAG 125045 |||||| | || | || |||| ||||||||| || ||| |||||||||| |||||| | Sbjct 4605321 AGATTTGTCTTGATGCCAATCAAGTATCATGAAATCTGGCAAATGTACAAGAAGGCTGAA 4605262 Query 125046 GCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACT 125105 ||||| |||||||| | ||||| | || || || || || |||| ||| | | Sbjct 4605261 GCCTCTTTTTGGACTGCTGAAGAAATTGACTTGAGTAAAGATTTGCACGACTGGAACAAC 4605202 Query 125106 CGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATT-TTGGCCTTCTTTGCCGGCTC 125164 | |||| || | ||| || | || || || || | | ||||| |||||||| | Sbjct 4605201 AGATTGAATGCTAATGAAAGATATTTCATTTC-CAGAGTCTTGGCATTCTTTGCTGCTAG 4605143 Query 125165 CGATGGAATCGTCAACGACAATCTG-TTGACACGATTCTCTCAAGA-GTTGACCAT-TCC 125221 || || ||||| ||||| || || |||| | |||||| || ||| | || ||| Sbjct 4605142 TGACGGTATCGTTAACGAAAACTTGGTTGAAAAC-TTCTCTGCCGAAGTTCA--ATGTCC 4605086 Query 125222 AGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTA 125281 ||| | || || ||||| |||||||||||||| || ||| | || || |||| || Sbjct 4605085 AGAAGCCAAATGTTTCTACGGTTTCCAAATCATGATGGAAAACATACATTCTGAAACTTA 4605026 Query 125282 CTCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAACACATGC-TCTTTAACG 125340 ||| ||||||| | || ||| ||||| || | | || | | ||||| | Sbjct 4605025 TTCTTTGTTGATTGATACTTATATTAAGGATCC-AAAAGAATCTGAATTCTTGTTTAATG 4604967 Query 125341 CAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATG 125400 | || || || | || | ||| ||||| ||| | |||| | | |||||| ||| Sbjct 4604966 CTATTGAAACTATCCCATGTATTAAGAAAAAAGCTGACTGGGCATTGAGATGGATCAATG 4604907 Query 125401 ACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCT 125460 | ||| | ||| || | ||| ||| |||| || || || || || || || || |||| Sbjct 4604906 ATGACCAAGCTTTGTTTGGCGAAAGATTGGTTGCCTTTGCTGCTGTTGAAGGTATTTTCT 4604847 Query 125461 TTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGG 125515 | || ||| |||||| | ||||||||| | || ||| | || | ||||| || Sbjct 4604846 TCTCTGGTTCTTTTGCTTCTATCTTTTGGTTAAAAAAGAGAGGTATGATGCCAGG 4604792 Score = 138 bits (152), Expect = 2e-27 Identities = 396/597 (66%), Gaps = 9/597 (2%) Strand=Plus/Minus Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 |||||||| | ||| ||||| || ||| ||||||||||||| || | || || || ||| Sbjct 3918321 TTTCCCATAAAGTACCATGAAATATGGCAAATGTACAAAAAAGCAGAAGCTTCTTTCTGG 3918262 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 || | ||| || | ||||| ||||| || | |||||| | | |||| | Sbjct 3918261 ACCGCCGAGGAAATTGATCTTGGTAAGGATTTGCATGATTGGAACTATAAGTTGAATAGC 3918202 Query 125118 ACTGAGCGAGAGTTT-ATATCGCACATTT-TGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175 | ||| | || ||| || || || | | | || || ||||||| || ||||| |||| Sbjct 3918201 AATGAAC-AGTTTTTCATTTC-CAGAGTGCTAGCATTTTTTGCCGCATCGGATGGCATCG 3918144 Query 125176 TCAACGACAATCTGTTGACACGATT-CTCT-CAAGAGTTGACCATTCCAGAGGTGTCGTG 125233 | || || ||||| | ||| ||| |||| | ||| | ||||| || | || Sbjct 3918143 TTAATGAGAATCTTGT-ACAGAATTTCTCTACCCAAGTACAG-ATTCCCGAAGCCAAATG 3918086 Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293 |||||| || || ||||| ||||| ||||| || || || || | |||||| |||| Sbjct 3918085 CTTTTATGGTTTTCAAATAATGATGGAGAATGTTCATTCAGAGACATACTCTCTGTTGAT 3918026 Query 125294 TGACATGTACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGT 125353 || | || |||| ||||| ||| | | | ||||| ||||| || || | Sbjct 3918025 AGATACTTATATTCTGGATCCTGAACAGGCCGAATTTTTATTTAATGCAATTGATACAAT 3917966 Query 125354 GCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTC 125413 || | || |||| || | |||| | || | ||||| || || || | ||| Sbjct 3917965 TCCATGCATTAAAGAAAAAGCAGACTGGGCGCTTAGATGGATTGAAGATGAAGACGCTTT 3917906 Query 125414 GTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTT 125473 | || || ||| | || ||||| || ||||| || || || || ||||| ||| ||| Sbjct 3917905 ATTTGCTGAAAGATTAGTAGCATTTGCTGCCGTTGAAGGTATATTTTTTTCCGGTTCTTT 3917846 Query 125474 TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGA 125533 || | || |||||||||||||| | || || |||||||| || || | || || Sbjct 3917845 CGCTTCGATATTTTGGCTCAAGAAAAGAGGTCTTATGCCCGGTCTTACTTTCTCCAATGA 3917786 Query 125534 GTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGT-TTCGCA 125589 ||| || | ||| || || || || || ||| |||||| | || ||| |||||| Sbjct 3917785 GTTGATTTGTCGCGATGAAGGTCTTCATACTGATTTTGCCTGTTTATTGTATTCGCA 3917729 >seq2 Length=4155432 Score = 98.7 bits (108), Expect = 1e-15 Identities = 304/459 (66%), Gaps = 20/459 (4%) Strand=Plus/Plus Query 97776 GGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGTTT 97835 |||||||||||||||||| |||| || || ||||| || ||| | ||||||||| | || Sbjct 221133 GGTTTGAGAAACTCTTTGTTGGTTGCTCCAATGCCAACTGCTTCTACTTCCCAAATTTTG 221192 Query 97836 GGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTACCAGAGACGCACCCAGTCT 97895 || | ||||| ||||||||| | ||| || ||||| || ||| | | || Sbjct 221193 GGTTACAATGAATGTTTTGAACCATACACTTCTAACATTTATTCCAGAAGAGTTCTTGCT 221252 Query 97896 GGAGAGTTTCAATTGACCAACGTGCACTTGGTTCGAGACTTGG-----AACGGCTCAATC 97950 || || |||||| | ||| ||||| | ||| |||| | || | | Sbjct 221253 GGCGAATTTCAAATCGTTAACCCATACTTGTTAAAAGATTTGGTTGACATGGGTTTATGG 221312 Query 97951 TGTGGAACGATGACATGGCCCAGTTGATCATGTACAACAATGGGTCCATTCAAAACATTA 98010 | | | ||| | || || | || | || | ||||| || ||||||||| ||| Sbjct 221313 TCTACTTCAATG--AAGGATCATATCATTA-GTGC--TAATGGTTCTATTCAAAAC-TTA 221366 Query 98011 CC-ATCATCCCGGAAGAGTTGCGCAGA-ATCTACAAGACTGTCTGGGAGATTCCGACCAA 98068 || | ||| || |||| ||| ||| | ||||| ||||| ||||||||| | || Sbjct 221367 CCAAACATTCCTCAAGAATTG-AAAGATTTGTACAAAACTGTTTGGGAGATTTCTCAAAA 221425 Query 98069 GACGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATCGTTCAA 98128 || | || ||| ||||||| || |||| | | |||||| || |||||| | || Sbjct 221426 GAAAATTATTGATTTGGCTGCTGATAGAGCTCCATTCATTGATCAATCTCAATCCATGAA 221485 Query 98129 TCTGTACGTTGCCGAGCCCACCTACAGTCGTA---TGACTTCGATACACTTTTACGCATG 98185 | | || | || |||| ||| | ||| ||||||| || || || |||| || Sbjct 221486 TATTCACATCAAGGA-CCCAACTATGG--GTAAATTGACTTCTATGCATTTCTACGGTTG 221542 Query 98186 GAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAAC 98224 ||| || || | ||||| || ||||||||| ||||||| Sbjct 221543 GAAGAAAGGTTTGAAGACCGGTATGTACTATTTGAGAAC 221581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059135157320