Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq4 152 4e-32 seq1 141 7e-29 seq3 136 3e-27 >seq4 Length=2685930 Score = 152 bits (168), Expect = 4e-32 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || || ||||| | || || |||||||| || ||||| || Sbjct 2594949 CCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAA 2595008 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | ||||| |||||||| ||||| | ||||| | ||||||||| |||| Sbjct 2595009 AGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 2595068 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||| ||| || ||| | || ||||| ||| | ||| || Sbjct 2595069 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACT 2595128 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15355 || ||||||||||||||||| |||| |||||| || ||| Sbjct 2595129 TCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAACGAAA 2595167 >seq1 Length=4909981 Score = 141 bits (156), Expect = 7e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| ||||| ||||| | ||||| |||||||| |||||||| || Sbjct 2135670 CCACCTCTCAATCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATGTTGTAGTCAGAC 2135729 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| | ||||| ||||| || ||||| | ||||| | ||||||||| |||| Sbjct 2135730 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2135789 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| ||| ||| ||| ||| | || || || || | ||| || Sbjct 2135790 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 2135849 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||||||||| || | || || ||||| ||||||||| Sbjct 2135850 TCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCATA 2135897 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| ||||| || || | ||||| |||||||| |||||||| || Sbjct 2135898 CCACCTCTCAATCTCAAAACCAAGTGCAATGTGGATTCTTTTTGGATGTTGTAGTCAGAC 2135957 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| | ||||| || || || ||||| | ||||| | ||||||||| |||| Sbjct 2135958 AAGGTTCTGCCATCTTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2136017 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| ||| ||| ||| ||| | || || || || | ||| || Sbjct 2136018 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 2136077 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || ||||||||||| || | || || || ||||||||||| Sbjct 2136078 TCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 2136124 >seq3 Length=2682731 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || || || || | |||||| || ||||| |||||||| || Sbjct 829581 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 829640 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| | ||||| |||||||| ||||| | ||||| | |||||| || |||| Sbjct 829641 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGA 829700 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| || ||| || ||| | || || || ||| ||| || Sbjct 829701 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACT 829760 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 || | ||||||||| ||||| || | ||||| || ||||||||||| || Sbjct 829761 TCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCATCTT 829810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362179169101587