Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017-
01-05] 7 sequences; 19,653,141 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq1 113 3e-20
seq4 96.9 2e-15
seq3 91.5 1e-13
>seq1
Length=4909981
Score = 113 bits (124), Expect = 3e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 43892 CAACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCG 43951
||||| ||||||||||| || |||||||| | ||| ||||||||||| || || ||
Sbjct 2135667 CAACCACCTCTCAATCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATGTTGTAGTCA 2135726
Query 43952 TTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGA 44011
|| | |||| |||||||| || || ||||| ||||| | ||| ||||| |
Sbjct 2135727 GACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGT 2135786
Query 44012 GGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCC 44071
|| | |||||| || ||| ||| || ||||| | ||| ||| || | | ||
Sbjct 2135787 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCA 2135846
Query 44072 ACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| || | || || |||||||| ||||| ||||| ||||| ||||||||
Sbjct 2135847 ACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2135896
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||||||||| || ||||| || | ||| |||||||| || || || ||
Sbjct 2135897 ACCACCTCTCAATCTCAAAACCAAGTGCAATGTGGATTCTTTTTGGATGTTGTAGTCAGA 2135956
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | |||| ||||| || || || ||||| ||||| | ||| ||||| | ||
Sbjct 2135957 CAAGGTTCTGCCATCTTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGG 2136016
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||| || ||| ||| || ||||| | ||| ||| || | | || ||
Sbjct 2136017 AATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 2136076
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || |||||||| ||||| ||||| || || ||||||||
Sbjct 2136077 TTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 2136124
>seq4
Length=2685930
Score = 96.9 bits (106), Expect = 2e-15
Identities = 155/221 (70%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||||||||| || |||||||| | || |||||||| ||||| || ||
Sbjct 2594948 ACCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAG- 2595006
Query 43954 TAATTGACGCT--CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGA 44011
|| | || |||| ||||||||||| || ||||| ||||| | ||| ||||| |
Sbjct 2595007 -AAAGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 2595065
Query 44012 GGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCC 44071
|| | ||||||||| ||| ||| || |||||| | ||| || || | | ||
Sbjct 2595066 GGAATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCG 2595125
Query 44072 ACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAA 44112
|| || | ||||| |||||||| || ||||| || || ||
Sbjct 2595126 ACTTCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAACGAA 2595166
>seq3
Length=2682731
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||||||||| || ||||| || | ||| || ||||| || || || ||
Sbjct 829580 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGA 829639
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | |||| ||||||||||| || ||||| ||||| | ||| || || | ||
Sbjct 829640 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGG 829699
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| ||||||||| ||| || || |||||| | ||| ||| || | | || ||
Sbjct 829700 AATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGAC 829759
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | ||||| || ||||| ||||| || || || || ||||||||
Sbjct 829760 TTCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCAT 829807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354777569733036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |