Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017-
01-05] 7 sequences; 19,653,141 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq3 113 4e-20
seq4 107 2e-18
seq1 107 2e-18
>seq3
Length=2682731
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| || ||||| ||||| || | || ||||| ||||| |||||||| || |
Sbjct 829581 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 829640
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| |||| || ||||||||||||||| || ||| | || | || |||||||| ||
Sbjct 829641 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGA 829700
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||||||||| || || ||| || | | ||| || ||| | ||| |
Sbjct 829701 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACT 829760
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211
|| | ||||||||| || || || || ||||| || ||||||||||| ||
Sbjct 829761 TCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCATCTT 829810
>seq4
Length=2685930
Score = 107 bits (118), Expect = 2e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| || ||||| |||||||| | |||||||||||||| || ||||| ||
Sbjct 2594949 CCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAA 2595008
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| ||| | ||||||||||||||| || ||| | || | || ||||| || ||
Sbjct 2595009 AGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 2595068
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||||||||| ||| || ||| || | | ||| | ||| || ||| |
Sbjct 2595069 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACT 2595128
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAA 20200
|||| |||||||||||| || ||||| ||||| || |||
Sbjct 2595129 TCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAACGAAA 2595167
>seq1
Length=4909981
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| || ||||| |||||||| | ||| ||||||||||| |||||||| || |
Sbjct 2135670 CCACCTCTCAATCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATGTTGTAGTCAGAC 2135729
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| ||| | |||||||||||| || || ||| |||| | || ||||| || ||
Sbjct 2135730 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2135789
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||| ||||| ||| || || || | | ||| || || || ||| |
Sbjct 2135790 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 2135849
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|||| || |||||||| || || || || |||||||| ||||||||
Sbjct 2135850 TCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2135896
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| || ||||| ||||| || | ||| ||||||||||| |||||||| || |
Sbjct 2135898 CCACCTCTCAATCTCAAAACCAAGTGCAATGTGGATTCTTTTTGGATGTTGTAGTCAGAC 2135957
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| ||| | ||||||||| || || || ||| |||| | || ||||| || ||
Sbjct 2135958 AAGGTTCTGCCATCTTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2136017
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||| ||||| ||| || || || | | ||| || || || ||| |
Sbjct 2136018 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 2136077
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209
|||| || |||||||| || || || || ||||| ||||||||||||
Sbjct 2136078 TCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATT 2136125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419587164203967
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |