Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq3 113 4e-20 seq4 107 2e-18 seq1 107 2e-18 >seq3 Length=2682731 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || ||||| ||||| || | || ||||| ||||| |||||||| || | Sbjct 829581 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 829640 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | |||| || ||||||||||||||| || ||| | || | || |||||||| || Sbjct 829641 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGA 829700 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| || || ||| || | | ||| || ||| | ||| | Sbjct 829701 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACT 829760 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211 || | ||||||||| || || || || ||||| || ||||||||||| || Sbjct 829761 TCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCATCTT 829810 >seq4 Length=2685930 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || ||||| |||||||| | |||||||||||||| || ||||| || Sbjct 2594949 CCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAA 2595008 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | ||||||||||||||| || ||| | || | || ||||| || || Sbjct 2595009 AGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 2595068 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| ||| || ||| || | | ||| | ||| || ||| | Sbjct 2595069 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACT 2595128 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAA 20200 |||| |||||||||||| || ||||| ||||| || ||| Sbjct 2595129 TCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAACGAAA 2595167 >seq1 Length=4909981 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || ||||| |||||||| | ||| ||||||||||| |||||||| || | Sbjct 2135670 CCACCTCTCAATCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATGTTGTAGTCAGAC 2135729 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||||||||| || || ||| |||| | || ||||| || || Sbjct 2135730 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2135789 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| ||| || || || | | ||| || || || ||| | Sbjct 2135790 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 2135849 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| || |||||||| || || || || |||||||| |||||||| Sbjct 2135850 TCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2135896 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || ||||| ||||| || | ||| ||||||||||| |||||||| || | Sbjct 2135898 CCACCTCTCAATCTCAAAACCAAGTGCAATGTGGATTCTTTTTGGATGTTGTAGTCAGAC 2135957 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | ||||||||| || || || ||| |||| | || ||||| || || Sbjct 2135958 AAGGTTCTGCCATCTTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2136017 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| ||| || || || | | ||| || || || ||| | Sbjct 2136018 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 2136077 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 |||| || |||||||| || || || || ||||| |||||||||||| Sbjct 2136078 TCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATT 2136125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419587164203967