Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq1 262 3e-65 >seq1 Length=4909981 Score = 262 bits (290), Expect = 3e-65 Identities = 582/863 (67%), Gaps = 15/863 (2%) Strand=Plus/Plus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 ||||| || ||| |||||| |||||||| ||||| ||||| || | || ||||| ||| Sbjct 4604441 TTTTGGTAGTCGGAAACTCTCTTTTCAAAGAAGTTAGTTTTACCGGCCAAAGAAATGTTT 4604500 Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTAT---TTTTTACACCCTAATTCTAGT 12976 |||||||| ||||| || || | |||| | ||| || || || || | | Sbjct 4604501 TCCATAAAGTCGAATGGGTTGGT--AACATT-GTAAACCTTCTTGTTGCCCAAAGCAACC 4604557 Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036 |||||||||||||||||||| || | || || ||| || | | |||||| || | Sbjct 4604558 AACAATCTGTCAGCAACAAATTCAACATATTGGCACATCAATTTAGCGTTCATGCCCAAA 4604617 Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACT 13096 | || |||| ||| || || || | | |||||| ||| || || ||| ||| Sbjct 4604618 AGAGAAACTGGCAAAGCATCGGTAAAGTATTCTTTTTCAATAGTGACAGCCTCGGTAATA 4604677 Query 13097 ATGTCTCTTATTACGTTCTCTAATGGAG--GATTTGATAGATGCTTAAACATCATACATG 13154 || | | | | | |||| | | | | |||| || || ||||| || || | Sbjct 4604678 ATCTTT-TCAACAATTTCTTGATTTGGTTTGTTTTGCAAG-TGTGAAAACAACAAGCAAG 4604735 Query 13155 CAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCG 13214 | || || ||||| ||||||||||| | || | || || || || |||| ||| | Sbjct 4604736 CGAAGTCGGTATGCAAACCTTCATCTCTGCAAATCAATTCATTAGAGAAGGTTAAACCTG 4604795 Query 13215 GCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTC 13274 |||| | |||| ||||| | |||||| |||| |||||| ||||| || || || || | Sbjct 4604796 GCATCATACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAAATAC 4604855 Query 13275 CTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATCC 13334 ||||||| || ||||| || | ||| ||||| ||| || | | | | | |||| Sbjct 4604856 CTTCAACAGCAGCAAAGGCAACCAATCTTTCGCCAAACAAAGCTTGGTCATCATTGATCC 4604915 Query 13335 ACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATA 13394 | | ||||||| ||||||| |||| || ||| |||| || || ||||| | Sbjct 4604916 ATCTCAATGCCCAGTCAGCTTTTTTCTTAATACATGGGATAGTTTCAATAGCATTAAACA 4604975 Query 13395 AATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTG 13454 | | | ||| || || |||||||||||| ||||| || ||| |||| | Sbjct 4604976 AGAATTCAGATTCTTTTGGATCCTTAATATAAGTATCAATCAACAAAGAATAAGTTTCAG 4605035 Query 13455 AATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAA 13514 |||| || ||||||||| ||||||||||| || |||||| | || |||| |||| Sbjct 4605036 AATGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGGACATTGAA 4605095 Query 13515 CTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaa 13574 |||||| | || |||| | |||||||||||||| || ||||||||||||||||| | Sbjct 4605096 CTTCGGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACGATACCGTCACTAGCAGCAAAGA 4605155 Query 13575 aaG-CAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAA---CTTTAACCAATCT 13630 | | |||| | || ||| || | | |||| || | ||| || ||| || Sbjct 4605156 ATGCCAAGACTCTG-GAAATGAAATATCTTTCATTAGCATTCAATCTGTTGTTCCAGTCG 4605214 Query 13631 GGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTA 13690 | |||||||| || || | || ||| | ||||||||||| || |||||||||| Sbjct 4605215 TGCAAATCTTTACTCAAGTCAATTTCTTCAGCAGTCCAAAAAGAGGCTTCAGCCTTCTTG 4605274 Query 13691 TACATCATCCATATATCCTTATA 13713 ||||| ||| || || | ||| Sbjct 4605275 TACATTTGCCAGATTTCATGATA 4605297 Score = 255 bits (282), Expect = 5e-63 Identities = 606/897 (68%), Gaps = 33/897 (4%) Strand=Plus/Plus Query 12847 CATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTC 12906 |||||| || |||||||| || || ||||| ||||| || || ||||| ||| | Sbjct 3917440 CATAACTTTCACCTTTTGATAATCAGATACCCTTTTCTCAAAGAAATTAGTTTTCCCTGC 3917499 Query 12907 TAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAAT--AGTATTTTTTACAC 12964 || ||||| |||||||||||||| || ||||| | |||| | || ||||| | Sbjct 3917500 CAATGAAATGTTTTCCATAAAATCAAATGGATTAGT--AACATTGTAGATCTTTTTTCTG 3917557 Query 12965 CCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAG 13024 || || | || ||||| ||||| |||||||| | |||||| ||||| || | | Sbjct 3917558 CCCAAAGAAATCAATAATCTATCAGCCACAAACTCAACGTACTGATTCATCAATGAAGCG 3917617 Query 13025 TTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAA-AGtttttttCTATATCAAC 13083 |||||||| | || |||| | ||||| || |||| | ||||| || ||||| Sbjct 3917618 TTCATTCCAAGCAAAGAAACAGATAATGCTTC-GTCAAAATAACGCTTTTCAATTTCAAC 3917676 Query 13084 TGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT----AGATGCT 13139 || || | | ||| | | | | || | ||| ||| |||| | | |||| Sbjct 3917677 CGCCTCTGTTATTATTT-TATCA--ACTATTTCTGCATCAGG-TTTGTTTTCCAAATGCG 3917732 Query 13140 TAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTG 13199 | ||| | ||| ||||||||| || | |||||||| | || || | ||| || | Sbjct 3917733 AATACAATAAACAGGCAAAATCAGTATGAAGACCTTCATCGCGACAAATCAACTCATTGG 3917792 Query 13200 AAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAAC 13259 | || || ||||| |||||||| |||| ||| || | ||||||||| | ||| || |||| Sbjct 3917793 AGAAAGTAAGACCGGGCATAAGACCTCTTTTCTTGAGCCAAAATATCGAAGCGAAAGAAC 3917852 Query 13260 CCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTAT 13319 | ||||||||||| |||||||| || ||||| |||| || |||||| || | | | Sbjct 3917853 CGGAAAAAAATATACCTTCAACGGCAGCAAATGCTACTAATCTTTCAGCAAATAAAGCGT 3917912 Query 13320 TTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTT 13379 || | || ||||| | ||||||| |||||||| ||||| ||| || | | Sbjct 3917913 CTTCATCTTCAATCCATCTAAGCGCCCAGTCTGCTTTTTCTTTAATGCATGGAATTGTAT 3917972 Query 13380 CTATTGCGTTAAATAAATAAtttttttCCT-TACTG--TCTAAAATATAAGTATCTATCA 13436 | ||||| ||||||||| | || ||| | | | || | ||||||||||||||||| Sbjct 3917973 CAATTGCATTAAATAAAAA---TTCGGCCTGTTCAGGATCCAGAATATAAGTATCTATCA 3918029 Query 13437 ATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATC 13496 | | || | |||||||||| ||| |||||| |||||| ||||||||||| ||| Sbjct 3918030 ACAGAGAGTATGTCTCTGAATGAACATTCTCCATCATTATTTGAAAACCATAAAAGCATT 3918089 Query 13497 TAGCCTCTGATACCTGAACTTCGG-AGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATC 13555 | || || | | ||| |||| || || |||| | | | | | || || ||||| || Sbjct 3918090 TGGCTTCGGGAATCTGTACTTGGGTAGAGAAAT-TCTGTACAAGATTCTCATTAACGATG 3918148 Query 13556 CCGTCACTAGCAGCaaaaaaaGCAAGTA-TGTG---CTTAATAAAttttttttCGTTTTC 13611 || || || |||||||| || || | | || | || || | || || | || Sbjct 3918149 CCATCCGATGCGGCAAAAAATGCTAGCACTCTGGAAATGAAAAACTGTTCATTGCTATT- 3918207 Query 13612 TGACAACTT-TA--ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCA 13668 |||||| || |||||| | ||||| || | ||| | ||||| ||||||| Sbjct 3918208 ---CAACTTATAGTTCCAATCATGCAAATCCTTACCAAGATCAATTTCCTCGGCGGTCCA 3918264 Query 13669 AAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAA 13725 |||||||| | || || || ||||| |||||| || | || |||||||| Sbjct 3918265 GAAAGAAGCTTCTGCTTTTTTGTACATTTGCCATATTTCATGGTACTTTATGGGAAA 3918321 Score = 255 bits (282), Expect = 5e-63 Identities = 588/870 (68%), Gaps = 28/870 (3%) Strand=Plus/Minus Query 12859 TTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918 |||||| || || ||||| |||||||| ||||| || || || |||| || ||||| Sbjct 4056749 TTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAATGAGATATT 4056690 Query 12919 TTCCATAAAATCGAAAGGATTTTTCGAACAATAGTA----TTTTTTACACCCTAATTCTA 12974 |||||| ||||| || ||||| || ||| | ||| || || |||| ||| | Sbjct 4056689 TTCCATGAAATCAAATGGATTGTT--AACGTT-GTACACCTTCTTGTTACCC-AATGACA 4056634 Query 12975 GTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTA 13034 ||||||||||||||||| ||||||| || || |||||| || ||||| || | Sbjct 4056633 CCAACAATCTGTCAGCAACGAACTCTACATATTGGCACATTAATGTGCAATTCATACCCA 4056574 Query 13035 TTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTC---GA 13091 ||| || |||| || || || ||| | | |||||| |||||||||||||| || Sbjct 4056573 ACAATGAAACTGGCAAGGCATCAGTGAAATACTCTTTTTCAATATCAACTGCTTCAGTGA 4056514 Query 13092 TAACTATGTCTCTT-ATTACGTTCTCTAA-TGGAGGATTTGATAGATGCTTAAACATCAT 13149 ||| ||| || | | |||| | ||| ||| | ||| ||||| || Sbjct 4056513 TAA-----TCTTTTCAACAATTTCTGCAGGTGGCTTGTTTTCCAAATGGGAAAACAACAA 4056459 Query 13150 ACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAG 13209 ||| ||||| || |||||| ||||||||||| || || ||||| || || || | Sbjct 4056458 ACAGGCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTTGGAGAAAGTCAA 4056399 Query 13210 ACCCGGCAT--AAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaa 13267 || ||||| || ||||| ||||| | ||| || || | |||||| ||||| || || Sbjct 4056398 CCCTGGCATCAAACCCCTC--TTTTTCAACCAGAAGATGGAAGCAAAAGAACCAGAGAAG 4056341 Query 13268 aaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTC 13327 || || |||||||| || ||||| || | ||| ||||||||| | | | | | Sbjct 4056340 AAAATACCTTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAATAAAGCCTCATCATCG 4056281 Query 13328 TCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCG 13387 | ||||| | ||||||| |||||| |||| || ||| |||| || || Sbjct 4056280 TTGATCCATCTCAAAGCCCAGTCGGCTTTTGCTTTATA-CATGGGATAGTTTCAATGGCA 4056222 Query 13388 TTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATAC 13447 || |||||| | | ||| || ||| || |||||||| || | || || Sbjct 4056221 TTGAATAAAAATTCAGATTCTTTTGGGTCCTTGATGTAAGTATCAATTAGCAAAGAGTAA 4056162 Query 13448 ATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGAT 13507 |||| || ||||||||||||||| ||||||||||||||||| || | || |||| Sbjct 4056161 GTTTCAGAGTGAATATTTTCCATCATAATTTGGAAACCATAAAAGAATTTGGCTTCTGGA 4056102 Query 13508 ACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCA 13567 || ||||||| | || |||| | |||||||| || || || || ||||||||| Sbjct 4056101 CATTGCACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAATACCATCACTAGCA 4056042 Query 13568 GCaaaaaaaG-CAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTT-TAA-- 13623 ||||| |||| ||| | | | ||| | | ||||||| | |||||| | | Sbjct 4056041 GCAAAGAAAGCCAACACTCTAGAGAGGAAA-TATCTTTCGTTGGCATTCAACTTGTCATT 4055983 Query 13624 CCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGC 13683 ||| || | | |||||| || || | ||| ||| | ||||| || ||||| |||| Sbjct 4055982 CCAGTCATGCATATCTTTACTCAAGTCGATCTCTTCAGCAGTCCAGAATGAAGCTTCAGC 4055923 Query 13684 CTTCTTATACATCATCCATATATCCTTATA 13713 |||||| ||||| |||||| || | ||| Sbjct 4055922 CTTCTTGTACATTTGCCATATTTCATGATA 4055893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982363231814