Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 271 2e-67 seq4 150 4e-31 seq3 143 6e-29 >seq1 Length=4909981 Score = 271 bits (300), Expect = 2e-67 Identities = 584/866 (67%), Gaps = 13/866 (2%) Strand=Plus/Minus Query 268700 AGATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTT 268759 |||||||| | | ||||| || || ||| || ||| |||||||| |||| | Sbjct 4605321 AGATTTGTCTTGATGCCAATCAAGTATCATGAAATCTGGCAAATGTACAAGAAGGCTGAA 4605262 Query 268760 GCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAAT 268819 || ||||||||||||| |||||| | || || | | || || || ||||| || Sbjct 4605261 GCCTCTTTTTGGACTGCTGAAGAAATTGACTTGAGTAAAGATTTGCACGACTGGAACAAC 4605202 Query 268820 ---TTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTG-CGTTTTTTGCAGTTAG 268875 || || | | |||||| || || || | | ||||| | || ||||| | ||| Sbjct 4605201 AGATTGAATGCTAATGAAAGATATTTCATTTCC-AGAGTCTTGGCATTCTTTGCTGCTAG 4605143 Query 268876 TGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGA 268935 ||| ||||||||||||||||| | || || || |||| | || || || ||| || Sbjct 4605142 TGACGGTATCGTTAACGAAAACTTGGTTGAAAACTTCTCTGCCGAAGTTCAATGTCCAGA 4605083 Query 268936 AGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAG 268995 ||||| |||||| ||||| ||||| || || ||||| || ||||| || | || Sbjct 4605082 AGCCAAATGTTTCTACGGTTTCCAAATCATGATGGAAAACATACATTCTGAAACTTATTC 4605023 Query 268996 TCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTAT 269055 | | || || ||||||||||| | ||| || ||| || | ||| | |||| Sbjct 4605022 TTTGTTGATTGATACTTATATTAAGGATCCAAAAGAATCTGAATTCTTGTTTAATGCTAT 4604963 Query 269056 GAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGAT-A 269114 |||||| ||| | | |||||| |||| ||||| ||| |||||| || ||| | Sbjct 4604962 TGAAACTATCCCATGTATTAAGAAAAAAGCTGACTGGGCATTGAGATGGATCAATGATGA 4604903 Query 269115 GCGCGCCTTAC--GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTC 269172 | || || || ||||| || ||||| ||||| ||||| |||||||| ||||| || Sbjct 4604902 CCAAGCTTTGTTTGGCGAAAGATTGGTTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTC 4604843 Query 269173 GGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTT 269232 || |||||||| ||||||||||||| || || ||||| | |||||||| ||||| || Sbjct 4604842 TGGTTCTTTTGCTTCTATCTTTTGGTTAAAAAAGAGAGGTATGATGCCAGGTTTAACCTT 4604783 Query 269233 CTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATT 269292 |||||| |||||||| |||| || |||||||| || |||||||||||| || || || Sbjct 4604782 CTCTAATGAATTGATTTGCAGAGATGAAGGTTTGCATACCGACTTCGCTTGCTTGTTGTT 4604723 Query 269293 TACTAATTATCTTTC-ACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATTCAG 269351 | | | ||| | | ||||||| |||||| | || | | ||||| | Sbjct 4604722 TTCACA----CTTGCAAAACAAACCAAATCAAGAAATTGTTGAAAAGATTATTACCGAGG 4604667 Query 269352 CTGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTATCGATCTTATCGGTATGA 269411 |||| || | |||| ||||| | || || ||| | | | |||| | || |||| Sbjct 4604666 CTGTCACTATTGAAAAAGAATACTTTACCGATGCTTTGCCAGTTTCTCTTTTGGGCATGA 4604607 Query 269412 ATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCTTTAG 269471 | |||| |||| ||||| || | || || |||| |||||| |||| |||| | Sbjct 4604606 ACGCTAAATTGATGTGCCAATATGTTGAATTTGTTGCTGACAGATTGTTGGTTGCTTTGG 4604547 Query 269472 GGTTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAG 269531 | | || || || ||| || || || |||||||| || || || || | Sbjct 4604546 GCAACAAGAAGGTTTACAATGTTACCAACCCATTCGACTTTATGGAAAACATTTCTTTGG 4604487 Query 269532 AAGGTAAGGCTAATTTCTTCGAGAAG 269557 ||||| |||| ||||| || ||| Sbjct 4604486 CCGGTAAAACTAACTTCTTTGAAAAG 4604461 Score = 221 bits (244), Expect = 3e-52 Identities = 593/892 (66%), Gaps = 31/892 (3%) Strand=Plus/Minus Query 268703 TTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTTGCT 268762 ||||| ||||||| ||| || | ||| |||||| ||||||||| | || | ||| Sbjct 3918330 TTTGTATTATTTCCCATAAAGTACCATGAAATATGGCAAATGTACAAAAAAGCAGAAGCT 3918271 Query 268763 TCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAA----AAA 268818 ||||| ||||| | || ||| | ||||| | | || || |||||||| || Sbjct 3918270 TCTTTCTGGACCGCCGAGGAAATTGATCTTGGTAAGGATTTGCATGATTGGAACTATAAG 3918211 Query 268819 TTTAAAACCAGAAGAAAGAAGATTTATATCTT-ATATT-CTTGCGTTTTTTGCAGTTAGT 268876 || || | || | ||| || ||| || | | | | || || |||||||| | Sbjct 3918210 TTGAATAGCA-ATGAAC--AGTTTTTCATTTCCAGAGTGCTAGCATTTTTTGCCGCATCG 3918154 Query 268877 GATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAA 268936 ||||| |||||||| || ||||| ||| |||| |||| | | ||||||||||| ||| Sbjct 3918153 GATGGCATCGTTAATGAGAATCTTGTACAGAATTTCTCTACCCAAGTACAGATTCCCGAA 3918094 Query 268937 GCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGT 268996 |||| ||| ||||| || || || ||| || || ||| |||||||||||| ||| | Sbjct 3918093 GCCAAATGCTTTTATGGTTTTCAAATAATGATGGAGAATGTTCATTCAGAGACATACTCT 3918034 Query 268997 CTATTAATAGATACTTATATAGATGATAACAACGAAAAGA---AAAGACTATTTTCTTCT 269053 || || |||||||||||||| ||| ||| || || ||||| | | Sbjct 3918033 CTGTTGATAGATACTTATATTCTGGATCCT---GAACAGGCCGAATTTTTATTTAATGCA 3917977 Query 269054 ATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGAT 269113 || || || || | | | ||||| | || ||||| || | |||||| | ||| Sbjct 3917976 ATTGATACAATTCCATGCATTAAAGAAAAAGCAGACTGGGCGCTTAGATGGATTGAAGAT 3917917 Query 269114 AGCG-CGCCTTAC--GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTT 269170 | ||| ||| | ||||| ||||| || ||||| || || ||||||||||| ||| Sbjct 3917916 GAAGACGCTTTATTTGCTGAAAGATTAGTAGCATTTGCTGCCGTTGAAGGTATATTTTTT 3917857 Query 269171 TCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACT 269230 || || ||||| || | || |||||| | ||||||||||| |||||||| || | ||| Sbjct 3917856 TCCGGTTCTTTCGCTTCGATATTTTGGCTCAAGAAAAGAGGTCTTATGCCCGGTCTTACT 3917797 Query 269231 TTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTA 269290 ||||| || || ||||| | | || |||||| | || || || || |||||||| Sbjct 3917796 TTCTCCAATGAGTTGATTTGTCGCGATGAAGGTCTTCATACTGATTTTGCCTGTTTATTG 3917737 Query 269291 TTTACTAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATTCA 269350 | | | ||| | | |||||||| | ||| | ||| | |||| ||| Sbjct 3917736 TATTCGCATT---TGGAAAACAAACCTGATGCAGAAATAGTTGATAAAATAATAACAGAG 3917680 Query 269351 GCTGTTTCTGTAGAAACAGAAT--TTCTAACGGAAGCTCTATCTATCGATCTTATCGGTA 269408 || ||| | |||| || | || | || ||||| ||||| | | | | || | Sbjct 3917679 GCGGTTGAAATTGAAA-AGCGTTATTTTGAC-GAAGCATTATCTGTTTCTTTGCTTGGAA 3917622 Query 269409 TGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCTT 269468 |||| || ||||| | || || |||| || |||||||||| || | |||| Sbjct 3917621 TGAACGCTTCATTGATGAATCAGTACGTTGAGTTTGTGGCTGATAGATTATTGATTTCTT 3917562 Query 269469 TAGGGTTTAGTAAAAA---ATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATAT 269525 | || || ||||| || || ||| ||||| ||| ||||||||| || || | Sbjct 3917561 TGGG---CAGAAAAAAGATCTACAATGTTACTAATCCATTTGATTTTATGGAAAACATTT 3917505 Query 269526 CATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAA 269577 |||| | ||| || |||||||||| ||||| ||||| | | ||||| || Sbjct 3917504 CATTGGCAGGGAAAACTAATTTCTTTGAGAAAAGGGTATCTGATTATCAAAA 3917453 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| | || | || | ||| ||||| |||||||| ||||| || |||||||| Sbjct 2135670 CCACCTCTCAATCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATGTTGTAGTCAGAC 2135729 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | ||||| || ||||| | ||| || ||||||||||| | || ||||| || || || Sbjct 2135730 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2135789 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||| || || |||||||| | || ||||| || | || || || ||| || Sbjct 2135790 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 2135849 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || | || || || |||||||| | || || ||||| || ||||| Sbjct 2135850 TCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2135896 Score = 113 bits (124), Expect = 1e-19 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || ||||| |||||||| || || || |||||||| | ||||| || ||||| | || Sbjct 2135922 TGCAATGTGGATTCTTTTTGGATGTTGTAGTCAGACAAGGTTCTGCCATCTTCCAACTGC 2135981 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || ||||||||||| | || ||||| || || || || ||||| || || |||||||| Sbjct 2135982 TTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTG 2136041 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | || ||||| || | || || || ||| || || | || || || |||||||| Sbjct 2136042 GACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTACCAGTT 2136101 Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563 | || || || || || |||||| || Sbjct 2136102 AAGGTCTTGACGAAAATTTGCATTATG 2136128 >seq4 Length=2685930 Score = 150 bits (166), Expect = 4e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| | || | || | ||| || ||||||||||| || ||||| |||||||| Sbjct 2594949 CCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAA 2595008 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || ||||| || ||||| | |||||| |||||||| || | || ||||| ||||| || Sbjct 2595009 AGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 2595068 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || |||||||| || |||||||| | ||| ||||| || | ||| ||| || ||| || Sbjct 2595069 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACT 2595128 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 || | ||||| || |||||||| | ||||| || || Sbjct 2595129 TCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAACGAA 2595166 >seq3 Length=2682731 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || || ||||| || || || || |||||||| | ||||||||| ||||| | |||| Sbjct 829605 TGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGT 829664 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || |||||||| || | || ||||||||||| || || |||||||| || || ||||| Sbjct 829665 TTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGGATCTTG 829724 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | ||| ||||| || | || ||| | ||| || || || ||||| |||||||| || Sbjct 829725 GATTTGACATTGTCAATAGTGTCGGAGGATTCGACTTCAAGGGTAATGGTCTTACCCGTT 829784 Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563 | ||||| || || || ||||| ||| Sbjct 829785 AAGGTTTTAACGAAAATTTGCATCTTG 829811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398296733956