Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017-
01-05] 7 sequences; 19,653,141 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq1 141 1e-28
seq6 129 7e-25
seq3 86.0 7e-12
>seq1
Length=4909981
Score = 141 bits (156), Expect = 1e-28
Identities = 365/548 (67%), Gaps = 35/548 (6%)
Strand=Plus/Plus
Query 6711 ATAATCTAACAAT-TCAAAATCTTCAAATTTAAAATCACATAAATTATCAGACttttttt 6769
|||||| |||||| |||||||| ||||| ||||| ||| | ||| ||| |||||| |
Sbjct 1824499 ATAATC-AACAATCTCAAAATCATCAAACTTAAAGTCATCAATATTTTCA-ACTTTTCTG 1824556
Query 6770 ttAATATTACAACAG-GTGAAGGTTTTATTGA-TCGAGTTAATTGTTCTTTTATAGCTTT 6827
|| || || |||| | ||| || || || | | || || | | ||||
Sbjct 1824557 TTGATCTT-CAACTTTGGGAAACTTCTAGGCTCTCTCTTGAGCTGCTCCTGCAATGCTTC 1824615
Query 6828 TATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCAT 6887
||||||||| |||| ||||||||| || | || ||||| || ||||| | |||
Sbjct 1824616 GATATGATCTTTGTAAACATGAGCATCGCCCATAGTGTGAATGAACTCACCGCAGTCCAT 1824675
Query 6888 ATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTAC 6947
||| | ||| |||||| | | || || |||||||||||||| | ||| || || ||
Sbjct 1824676 GTCACAAACTTCAGCAATCATTTTGGTCAACAATGCATAAGAAGCAATATTGAATGGCAC 1824735
Query 6948 ACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAG---ATAAAATATTGTCT-- 7002
|| | ||||||||| |||||||||| ||| ||||| | || | | ||||
Sbjct 1824736 CCCAAGTCCCATATCACAGGATCTTTGAT-ACA---ACAAGCAACTCAACTTTGGTCTGC 1824791
Query 7003 --------------ATAGCATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCT 7048
| | ||||| |||| || || || ||||| ||||| |||
Sbjct 1824792 CTTCTTTGGGGAAATTCACGTAAAACTGACTAAACACGTGGCATGGCGGTAA---TGCCA 1824848
Query 7049 GATCT---ATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTG 7105
| | | ||| | || |||||||||| ||| | || | |||||||| |||||| |
Sbjct 1824849 TTTTTGGAAAATCTGGAGGGTTCCAAGCAGACATAATGATTCTTCTATCATATGGATTGG 1824908
Query 7106 TTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTAT 7165
|||| ||||| |||| | || |||||| | ||||| || || | |||||
Sbjct 1824909 TTTTCAATTTATGGATAACTTGGGCTAGTTGATCAACTCCCTGGCCCGAGTAGTCAGTAT 1824968
Query 7166 GACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAAT 7225
||||| | |||| | ||| |||||||| |||||||| || ||||| | || || | ||
Sbjct 1824969 CACAATCTTTATATTCAGCACCAAAATGCCTCCATTGGAATCCATACACCGGTCCAAGAT 1825028
Query 7226 CACCTTCT 7233
| ||||||
Sbjct 1825029 CGCCTTCT 1825036
>seq6
Length=1400908
Score = 129 bits (142), Expect = 7e-25
Identities = 387/590 (66%), Gaps = 27/590 (5%)
Strand=Plus/Minus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| |||||||| ||||| | ||||| |||| || || || | ||||||||| ||
Sbjct 952058 AAGTTTGAAGATATGGGTATTGGTGGGTTAGACACGGAGTTCTCGCAGATTTTCAGAAGA 951999
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATC-GAAATAATaaaaaaaTTAGGCTGTAAACATAT 164516
|| ||||| ||| | | |||| | | | |||| | ||||| || || ||| |
Sbjct 951998 GCTTTTGCATCTCG-TATTTTCCCACCTGGCTTAATTGACAAATTGGGGATCAATCATGT 951940
Query 164517 AAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCAT 164576
||||| | || | ||| || || ||| |||||||| ||||| ||| || ||
Sbjct 951939 TAAAGGGTTGTTGCTTTTTGGCCCCCCAGGTACTGGTAAAACTTTAATTGCTAGAAAAAT 951880
Query 164577 TGCTCAAGCTTTTAAATCGC------GACCCGTTAAAATTGTTAATGGTCCTGAATTATT 164630
|| | || | || ||| || || || || |||||||| ||||| ||| | |
Sbjct 951879 TGGTAAAT-TATTGAATGGCTCTGCTGAACCC--AAGATTGTTAACGGTCCAGAAATCCT 951823
Query 164631 GAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGA 164690
|||||| || ||| || |||| ||| ||||||| ||||| | || || ||||
Sbjct 951822 CTCCAAATACGTTGGTAGTTCTGAAGAGAATATTAGAAATTTGTTCAAAGATGCAGAAGC 951763
Query 164691 AGAACAAAAGA--AAGCAGGTTTAGCTAGTAAATTACATGTTATTGTTTTTGATGAGATA 164748
||| | ||| ||| ||| | || | || ||| ||||| | ||||| || |
Sbjct 951762 CGAATACAAGGCCAAGAAGGAAAA-CTCATCC-TTGCATATTATTATCTTTGACGAATTG 951705
Query 164749 GATGCTCTTTGCAAAAAACGTGG---------TGATAATAT---TATTCATGATGCAGTG 164796
||| || ||| ||| || | || |||| || | || |||| |||
Sbjct 951704 GATTCTGTTTTTAAACAAAGAGGCTCAAGAGGTGATGGTACCGGTGTTGGTGATAATGTG 951645
Query 164797 GTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTA 164856
|||||||| ||| | | ||||| |||||||| || || ||||| ||||| | |
Sbjct 951644 GTTAATCAATTGTTAGCCAAAATGGATGGTGTTGACCAGTTGAATAACATTTTGGTGATT 951585
Query 164857 GGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAA 164916
|| |||||||| || | |||||| |||||| |||| |||||| | || ||| |||| |||
Sbjct 951584 GGGATGACCAATCGTCTTGATTTGATTGATAATGCGTTATTAAGGCCAGGTAGATTTGAA 951525
Query 164917 TTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTT 164966
|| || | || || |||||| || || | || || ||||||||
Sbjct 951524 GTGCAAGTGGAGATTAAATTACCTGATAAGCATGGTCGTAGACAAATTTT 951475
>seq3
Length=2682731
Score = 86.0 bits (94), Expect = 7e-12
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 19362 AAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATTTATC 19421
|||| ||||| || ||||| ||| | ||||||||| || |||||| | ||||
Sbjct 1482590 AAATTGGTGACAAATTTGCCTCTAGACACGGTCAAAAAGGTACTATTGGTATCACTTATA 1482649
Query 19422 GTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAACCCAC 19481
| || ||||||||||| |||||| ||| || | || || ||| | ||||||| || |
Sbjct 1482650 GACATGAAGATATGCCATTTACTGCAGAAGGGGTGGTTCCAGATTTGGTTATTAATCCGC 1482709
Query 19482 ATGCTTTTCCAAGTCGAATGAC 19503
||||| ||||| ||| |||||
Sbjct 1482710 ATGCTATTCCATCTCGTATGAC 1482731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871947861200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |