Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017-
01-05] 7 sequences; 19,653,141 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq3 143 2e-29
seq1 136 4e-27
seq4 123 2e-23
>seq3
Length=2682731
Score = 143 bits (158), Expect = 2e-29
Identities = 174/236 (74%), Gaps = 1/236 (0%)
Strand=Plus/Plus
Query 94772 TTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTA 94831
|||||| | || |||||||||| ||| ||||||||||| || ||||||||||| | |||
Sbjct 829573 TTTTAC-CACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTG 829631
Query 94832 TAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGA 94891
|| || || ||| | ||| |||| ||||| || ||||||| |||||||| |||
Sbjct 829632 TAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGA 829691
Query 94892 TCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCG 94951
|| || ||||||||||||||||| | || || | ||||| | | | |||||| | |
Sbjct 829692 TCAGGTGGAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAG 829751
Query 94952 TGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| |||| || ||||| || || || | ||||| || || || |||||
Sbjct 829752 GATTCGACTTCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCAT 829807
>seq1
Length=4909981
Score = 136 bits (150), Expect = 4e-27
Identities = 171/235 (73%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || || |||||||||| ||| ||||||||||| || ||||| ||||| | ||| |
Sbjct 2135890 TTTGCATACCACCTCTCAATCTCAAAACCAAGTGCAATGTGGATTCTTTTTGGATGTTGT 2135949
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
| || || || || ||| |||| ||| || || |||| || |||||||| || |
Sbjct 2135950 AGTCAGACAAGGTTCTGCCATCTTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGT 2136009
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
|||| ||||||||||| ||||| | ||| || | |||||| | | | ||||||||
Sbjct 2136010 CTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAG 2136069
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || | ||||||||||| ||||| | || || || || || |||||
Sbjct 2136070 ATTCAACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 2136124
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| ||||| ||||| || ||||| ||||| | ||| || || |
Sbjct 2135670 CCACCTCTCAATCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATGTTGTAGTCAGAC 2135729
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || || ||| |||| || || || |||| || |||||||| || ||||| |||
Sbjct 2135730 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 2135789
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | ||| || | |||||| | | | |||||||| || ||
Sbjct 2135790 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 2135849
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | ||||||||||| ||||| | || || |||||||| |||||
Sbjct 2135850 TCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2135896
>seq4
Length=2685930
Score = 123 bits (136), Expect = 2e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| ||||| |||||||||||||| ||||| | || || ||
Sbjct 2594949 CCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAA 2595008
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || || ||| |||| ||||| || ||||||| |||||||| || || || |||
Sbjct 2595009 AGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 2595068
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||||||||| | ||| || | ||||| | | | ||||| | |||||
Sbjct 2595069 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACT 2595128
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998
|| | || |||||||| ||||| | |||||| || ||
Sbjct 2595129 TCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAACGAA 2595166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448291160774520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |