Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2 100 4e-17 seq1 98.7 2e-16 >seq2 Length=4155432 Score = 100 bits (110), Expect = 4e-17 Identities = 174/252 (69%), Gaps = 1/252 (0%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||||| | |||| ||||| ||||| ||||| |||||||||||| | | |||| | Sbjct 2761821 AGATCT-TGAGAGACAACATTCAAGGTATCACTAAGCCAGCTATCAGAAGATTGGCCAGA 2761879 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || || ||| | |||| ||| | || ||||| || | | ||| ||||| Sbjct 2761880 AGAGGTGGTGTGAAACGTATTTCTGCTTTGATTTACGAAGAAGTTAGAGGTGTCTTGAAA 2761939 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 |||| | | | ||||||| || || || ||||| || ||||| || | ||| Sbjct 2761940 TCCTTCTTGGAAAACGTTATCAGAGACGCCGTCACTTATACTGAACACGCCAAGAGAAAG 2761999 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 ||||| || || ||||| |||| || || ||||| | ||||| | | | || ||| Sbjct 2762000 ACTGTTACTTCTTTGGATGTCGTTTACGCTTTGAAGAGACAAGGTAGAACTTTGTACGGT 2762059 Query 16688 TTTGGAAGTTAA 16699 || || ||||| Sbjct 2762060 TTCGGTGGTTAA 2762071 >seq1 Length=4909981 Score = 98.7 bits (108), Expect = 2e-16 Identities = 167/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||||||||| ||||| |||||||| ||||| ||| | | ||||| | | ||||| | Sbjct 4041362 GAGATAACATTCAAGGTATCACCAAACCAGCCATCAGAAGATTGGCTAGAAGAGGTGGTG 4041421 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| | || | ||| | |||||||| | | | ||| ||||| ||| | Sbjct 4041422 TCAAGCGTATTTCCGCTTTGATTTATGAAGAAGTCAGAGGTGTGTTGAAATCCTTTTTGG 4041481 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 | | ||| ||| ||||| || || || || ||||| || | ||||| || || | Sbjct 4041482 AAAACGTCATCAGAGATGCCGTCACTTACACTGAACACGCAAAGAGAAAGACCGTTACTT 4041541 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | ||||| | || || || ||||| | ||||| | | | ||||||||||| ||| Sbjct 4041542 CTTTGGATGTTGTTTACGCTTTGAAGAGACAAGGTAGAACCTTGTATGGTTTTGGTGGTT 4041601 Query 16698 AA 16699 || Sbjct 4041602 AA 4041603 Score = 86.0 bits (94), Expect = 1e-12 Identities = 172/254 (68%), Gaps = 1/254 (0%) Strand=Plus/Minus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||||| | |||||||||| ||||| ||||| ||||||||||| | | | || | Sbjct 2447360 AGATCT-TGAGAGATAACATTCAAGGTATCACTAAGCCAGCTATTAGAAGATTAGCCAGA 2447302 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || || ||| | || | ||| | || ||||| | | | ||||||||| Sbjct 2447301 AGAGGTGGTGTGAAACGTATTTCCGCTTTGATTTACGAAGAAGTCAGAGGTGTTTTGAAA 2447242 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 ||| | | | |||||| |||||| || || || || ||||| || | ||| Sbjct 2447241 TCCTTTTTGGAAAACGTTATTAGAGATGCTGTCACTTACACTGAACACGCAAAGAGAAAG 2447182 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 ||||| || || ||||| | || || || ||||| | ||||| | | | || ||| Sbjct 2447181 ACTGTTACTTCTTTGGATGTTGTTTACGCTTTGAAGAGACAAGGTAGAACTTTGTACGGT 2447122 Query 16688 TTTGGAAGTTAATC 16701 || || ||||||| Sbjct 2447121 TTCGGTGGTTAATC 2447108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075193599851