Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 172 1e-37 >seq1 Length=4909981 Score = 172 bits (190), Expect = 1e-37 Identities = 489/736 (66%), Gaps = 28/736 (4%) Strand=Plus/Minus Query 22216 CTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCA 22275 |||||||| ||||| | | || || || ||| ||||||||| || ||||| | Sbjct 3918174 CTAGCATTTTTTGCCGCATCGGATGGCATCGTTAATGAGAATCTTGTACAGAATTTCTCT 3918115 Query 22276 TCTGAAATTCA-ATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAA 22334 | || | || || ||| || |||| ||| || |||||| | ||||| ||||| || || Sbjct 3918114 ACCCAAGTACAGATTCCC-GAAGCCAAATGCTTTTATGGTTTTCAAATAATGATGGAGAA 3918056 Query 22335 TGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGAC-GAAC 22393 |||||| | || ||||| ||| || || || | ||| || | | | | |||| Sbjct 3918055 TGTTCATTCAGAGACATACTCTCTGTTGATAGAT--ACT--TATATTCTGGATCCTGAAC 3918000 Query 22394 AA--CGAAACTT-ATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATT 22450 | |||| || ||| || ||| || |||| || ||||| | || ||||| | Sbjct 3917999 AGGCCGAATTTTTATTTAATGCAATTGATACAATTCCATGCATTAAAGAAAAAGCAGACT 3917940 Query 22451 GGGCGCTGAAATGGATGAACAATGAA--CG-TTCATTCGCGGAACGTCTTATTGCATTTG 22507 ||||||| | |||||| | ||||| || || ||| || ||| | | | ||||||| Sbjct 3917939 GGGCGCTTAGATGGATTGAAGATGAAGACGCTTTATTTGCTGAAAGATTAGTAGCATTTG 3917880 Query 22508 CTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaC 22567 ||| |||||||| || || ||||| || | || | | || |||||||| || ||| Sbjct 3917879 CTGCCGTTGAAGGTATATTTTTTTCCGGTTCTTTCGCTTCGATATTTTGGCTCAAGAAAA 3917820 Query 22568 GTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTC 22627 | | ||||||| ||||| || || || |||||||| ||| | || ||||| ||||||| Sbjct 3917819 GAGGTCTTATGCCCGGTCTTACTTTCTCCAATGAGTTGATTTGTCGCGATGAAGGTCTTC 3917760 Query 22628 ATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATATGAAA 22687 |||| |||||||| ||| | | ||| | ||| | | ||| || ||| | Sbjct 3917759 ATACTGATTTTGCCTGTTTATTGTATTCG---CATTTGGAAAACAAA---CCTGATGCAG 3917706 Query 22688 CTGTACTTGAT---ATTATTACAAATGCAGTTGAACTTGAA---CGTCTATTTATTTGCG 22741 || ||||| || || ||| | || |||||| ||||| ||| |||| || || Sbjct 3917705 AAATAGTTGATAAAATAATAACAGAGGCGGTTGAAATTGAAAAGCGT-TATT--TTGACG 3917649 Query 22742 AGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAAT 22801 | || ||| | || | | |||| || || || || |||| | || || | | Sbjct 3917648 AAGCATTATCTGTTTCTTTGCTTGGAATGAACGCTTCATTGATGAATCAGTACGTTGAGT 3917589 Query 22802 TTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATC 22861 |||| || ||| | |||| ||||| | || |||| || || || ||||| Sbjct 3917588 TTGTGGCTGATAGATTATTGATTTCTTTGGGCAGAAAAAAGATCTACAATGTTACTAATC 3917529 Query 22862 CATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAG 22921 ||||||| | |||||| |||||| | | ||| || || |||||||| || ||||| | Sbjct 3917528 CATTTGATTTTATGGAAAACATTTCATTGGCAGGGAAAACTAATTTCTTTGAGAAAAGGG 3917469 Query 22922 TTGGTGAATACCAAAA 22937 | ||| || ||||| Sbjct 3917468 TATCTGATTATCAAAA 3917453 Score = 123 bits (136), Expect = 6e-23 Identities = 451/693 (65%), Gaps = 41/693 (6%) Strand=Plus/Plus Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338 ||| | |||| ||||| |||| || || |||||| | ||||| ||||| |||||| || Sbjct 4056091 GAAGTGCAATGTCCAGAAGCCAAATTCTTTTATGGTTTCCAAATTATGATGGAAAATATT 4056150 Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAACAACGA 22398 ||| | ||||| || ||| || ||| | | | | || | | | ||| | || || Sbjct 4056151 CACTCTGAAACTTACTCTTTG---CTA-ATTGATACTTACATCA--AGGACCCAAAA-GA 4056203 Query 22399 AACT-------TATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTG 22451 | || ||||| || ||| || || | || || ||| | ||| | || || Sbjct 4056204 ATCTGAATTTTTATTCAATGCCATTGAAACTATCCCATGTATAAAGCAAAAGCC-GACTG 4056262 Query 22452 GGCGCTGAAATGGATGAACAATGA--ACG-TTCATTCGCGGAACGTCTTATTGCATTTGC 22508 ||| ||| |||||| ||| |||| | | || ||| | ||| | | |||| ||||| Sbjct 4056263 GGCTTTGAGATGGATCAACGATGATGAGGCTTTATTTGGTGAAAGATTGGTTGCCTTTGC 4056322 Query 22509 TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCG 22568 || |||||||| |||||||| ||||| | ||| | | ||||| ||| | ||||| | Sbjct 4056323 TGCTGTTGAAGGTATTTTCTTCTCTGGTTCTTTTGCTTCCATCTTCTGGTTGAAAAAGAG 4056382 Query 22569 TGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCA 22628 | | ||||| || | || || || || || | ||| | ||||||| ||| | || Sbjct 4056383 GGGTTTGATGCCAGGGTTGACTTTCTCCAACGAACTTATTTCCAGAGATGAAGGTTTGCA 4056442 Query 22629 TACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTT-CCATATG--- 22684 || || ||||| ||| || | | | || || || |||| ||| || Sbjct 4056443 CACAGACTTTGCCTGTTTGTTGTTT-----TCCCAT--TTGGAAAACAAGCCACCTGCAG 4056495 Query 22685 AAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAAC--GTCTATTTATTTGCGA 22742 ||| ||| | ||||| || | |||||||| ||||| | ||||| || | Sbjct 4056496 AAATTGTTGAAAAGATTATCACTGAAGCAGTTGATATTGAAAAAGAGTATTTCACTG--A 4056553 Query 22743 GGCGTTACCAGTAAGTCTCATTG----GTATCAATGCCGAATCAATGAGTACATATATTA 22798 || || ||||| |||||| |||| ||| | || |||| | |||| | Sbjct 4056554 TGCCTTGCCAGTT----TCATTGTTGGGTATGAATTGCACATTAATGTGCCAATATGTAG 4056609 Query 22799 AATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTA 22858 | || ||||| || | | || | ||| | ||| | ||| || ||||| | Sbjct 4056610 AGTTCGTTGCTGACAGATTGTTGGTGTCATTGGGTAACAAGAAGGTGTACAACGTTAACA 4056669 Query 22859 ATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAA 22918 |||||||||| | |||||| ||| ||| | | || |||||||| ||||| ||||| | Sbjct 4056670 ATCCATTTGATTTCATGGAAAATATCTCATTAGCTGGTAAGACCAACTTCTTTGAAAAGA 4056729 Query 22919 GAGTTGGTGAATACCAAAAAGCAGGTGTTATGG 22951 |||| ||| ||||||||||| |||||||||| Sbjct 4056730 GAGTCTCTGATTACCAAAAAGCTGGTGTTATGG 4056762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353483105474