Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017-
01-05] 7 sequences; 19,653,141 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq4 132 4e-26
seq1 131 1e-25
seq3 120 3e-22
>seq4
Length=2685930
Score = 132 bits (146), Expect = 4e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059
|| || ||||| || ||||| ||| | |||||| | |||||||| | |||||||||
Sbjct 2595166 TTCGTTAAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCATT 2595107
Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119
|| | |||||| |||||| ||||||||||| || || || || ||||| ||| ||
Sbjct 2595106 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 2595047
Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179
|| | | || || ||| | ||||||| ||||| | | || || || || ||||||
Sbjct 2595046 ATCTTTGCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAAAAA 2594987
Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||| | ||||| || || ||||||||||| ||
Sbjct 2594986 GAATCTACTTTGCATTTGGTCTTGAGATTGAGAGGTGG 2594949
>seq1
Length=4909981
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| || || |||||||| ||| | || || | ||||| || |
Sbjct 2135896 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2135837
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | ||||| |||||| ||||| ||||| || || || || |||
Sbjct 2135836 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 2135777
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| |||||| | || |||||| | ||||||| ||||| | | || || |||
Sbjct 2135776 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAAC 2135717
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||||||||| ||| | ||||| || || ||||||||||| ||
Sbjct 2135716 ATTCAAAAAGAATCCACATTGCATTTGGTTTTGAGATTGAGAGGTGG 2135670
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
|| ||||||| | || || || || |||||||| ||| | || || | ||||| || |
Sbjct 2136128 CATAATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATC 2136069
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
||||| || || | ||||| |||||| ||||| ||||| || || || ||
Sbjct 2136068 TTCTGACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGA 2136009
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
||||| ||| |||||| | || ||||| | ||||||| ||||| | | || ||
Sbjct 2136008 CCAACAAAGATTGATTTTTGCTGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTA 2135949
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| ||||||||||| ||| | || || || || ||||||||||| ||
Sbjct 2135948 CAACATCCAAAAAGAATCCACATTGCACTTGGTTTTGAGATTGAGAGGTGG 2135898
Score = 107 bits (118), Expect = 2e-18
Identities = 297/448 (66%), Gaps = 33/448 (7%)
Strand=Plus/Minus
Query 104602 ACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAA 104661
|||| |||||||| || || ||||| || | | || ||||| | ||| || || ||
Sbjct 4056733 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAATGAGATATTTTCCATGAAATCAAAT 4056674
Query 104662 GGATTC--AAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCA 104719
||||| || || || | || || || |||| | | ||||| || || || |
Sbjct 4056673 GGATTGTTAACGTTGTACACC-TTCTTGTTACCCAATGAC-ACCAACAATCTGTCAGCAA 4056616
Query 104720 CAAATTCGATGTACTCGCACATAGAATGTGCA-TTCATGCCCAGCATTGCGACGGGTAAA 104778
| || || | || | |||||| |||||||| ||||| |||| || || || || ||
Sbjct 4056615 CGAACTCTACATATTGGCACATT-AATGTGCAATTCATACCCAACAATGAAACTGGCAAG 4056557
Query 104779 GCGTTAGTaaaaaaaTCTTTCTCGATGTCCACGGCTTCCTTAAACATGTT--CAGCACCT 104836
|| | ||| ||| | ||||| || || || || ||||| | | || || || || |
Sbjct 4056556 GCATCAGTGAAATACTCTTTTTCAATATCAACTGCTTCAGTGATAATCTTTTCAACAATT 4056497
Query 104837 TGCTTTCAGAAAGCTTGTCCTCTT--TGGCAATATATTTGTTGTAATAGAGGCAGGCAAA 104894
| | ||| |||||| || ||| || | | | | ||||||||
Sbjct 4056496 TC--TGCAGGTGGCTTGTTTTCCAAATGGGAAAACA-----------ACAAACAGGCAAA 4056450
Query 104895 GTCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAAGCCAGG--T 104952
|||||||||||| ||||||||||| ||||||||||||||| | ||||||| || || |
Sbjct 4056449 GTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTTGGAGAAAGTCAACCCTGGCAT 4056390
Query 104953 AGAGCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGGAGAAAAAG 105012
| ||||| || ||| | || |||||| ||||||| ||| ||||| ||
Sbjct 4056389 CAAACCCCTCTT--------TTTCAACCAGAAGATGGAAGCAAAAGAACCAGAGAAGAAA 4056338
Query 105013 ACACCTTCGACGATGGCAAACGCGACCA 105040
| |||||| || ||||| || ||||
Sbjct 4056337 ATACCTTCAACAGCAGCAAAGGCAACCA 4056310
>seq3
Length=2682731
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
||| |||||| | || || ||||| ||||| || || | |||||| | |||||||| |
Sbjct 829811 CAAGATGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATC 829752
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
| |||||| || || | |||||| ||||| ||||||||||| || || || ||
Sbjct 829751 CTCCGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTGA 829692
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
|||||| ||| |||| | | || || ||| | ||||||| |||| | || ||
Sbjct 829691 TCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTA 829632
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| ||||| ||||| || | || || || || ||||||||||| ||
Sbjct 829631 CAACATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 829581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935963321085
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |