Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq4 132 4e-26 seq1 131 1e-25 seq3 120 3e-22 >seq4 Length=2685930 Score = 132 bits (146), Expect = 4e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 || || ||||| || ||||| ||| | |||||| | |||||||| | ||||||||| Sbjct 2595166 TTCGTTAAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCATT 2595107 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | |||||| |||||| ||||||||||| || || || || ||||| ||| || Sbjct 2595106 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 2595047 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | | || || ||| | ||||||| ||||| | | || || || || |||||| Sbjct 2595046 ATCTTTGCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAAAAA 2594987 Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| | ||||| || || ||||||||||| || Sbjct 2594986 GAATCTACTTTGCATTTGGTCTTGAGATTGAGAGGTGG 2594949 >seq1 Length=4909981 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || |||||||| ||| | || || | ||||| || | Sbjct 2135896 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2135837 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| |||||| ||||| ||||| || || || || ||| Sbjct 2135836 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 2135777 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||||| | || |||||| | ||||||| ||||| | | || || ||| Sbjct 2135776 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAAC 2135717 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||||||||| ||| | ||||| || || ||||||||||| || Sbjct 2135716 ATTCAAAAAGAATCCACATTGCATTTGGTTTTGAGATTGAGAGGTGG 2135670 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 || ||||||| | || || || || |||||||| ||| | || || | ||||| || | Sbjct 2136128 CATAATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATC 2136069 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 ||||| || || | ||||| |||||| ||||| ||||| || || || || Sbjct 2136068 TTCTGACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGA 2136009 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||||| ||| |||||| | || ||||| | ||||||| ||||| | | || || Sbjct 2136008 CCAACAAAGATTGATTTTTGCTGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTA 2135949 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||||||||| ||| | || || || || ||||||||||| || Sbjct 2135948 CAACATCCAAAAAGAATCCACATTGCACTTGGTTTTGAGATTGAGAGGTGG 2135898 Score = 107 bits (118), Expect = 2e-18 Identities = 297/448 (66%), Gaps = 33/448 (7%) Strand=Plus/Minus Query 104602 ACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAA 104661 |||| |||||||| || || ||||| || | | || ||||| | ||| || || || Sbjct 4056733 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAATGAGATATTTTCCATGAAATCAAAT 4056674 Query 104662 GGATTC--AAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCA 104719 ||||| || || || | || || || |||| | | ||||| || || || | Sbjct 4056673 GGATTGTTAACGTTGTACACC-TTCTTGTTACCCAATGAC-ACCAACAATCTGTCAGCAA 4056616 Query 104720 CAAATTCGATGTACTCGCACATAGAATGTGCA-TTCATGCCCAGCATTGCGACGGGTAAA 104778 | || || | || | |||||| |||||||| ||||| |||| || || || || || Sbjct 4056615 CGAACTCTACATATTGGCACATT-AATGTGCAATTCATACCCAACAATGAAACTGGCAAG 4056557 Query 104779 GCGTTAGTaaaaaaaTCTTTCTCGATGTCCACGGCTTCCTTAAACATGTT--CAGCACCT 104836 || | ||| ||| | ||||| || || || || ||||| | | || || || || | Sbjct 4056556 GCATCAGTGAAATACTCTTTTTCAATATCAACTGCTTCAGTGATAATCTTTTCAACAATT 4056497 Query 104837 TGCTTTCAGAAAGCTTGTCCTCTT--TGGCAATATATTTGTTGTAATAGAGGCAGGCAAA 104894 | | ||| |||||| || ||| || | | | | |||||||| Sbjct 4056496 TC--TGCAGGTGGCTTGTTTTCCAAATGGGAAAACA-----------ACAAACAGGCAAA 4056450 Query 104895 GTCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAAGCCAGG--T 104952 |||||||||||| ||||||||||| ||||||||||||||| | ||||||| || || | Sbjct 4056449 GTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTTGGAGAAAGTCAACCCTGGCAT 4056390 Query 104953 AGAGCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGGAGAAAAAG 105012 | ||||| || ||| | || |||||| ||||||| ||| ||||| || Sbjct 4056389 CAAACCCCTCTT--------TTTCAACCAGAAGATGGAAGCAAAAGAACCAGAGAAGAAA 4056338 Query 105013 ACACCTTCGACGATGGCAAACGCGACCA 105040 | |||||| || ||||| || |||| Sbjct 4056337 ATACCTTCAACAGCAGCAAAGGCAACCA 4056310 >seq3 Length=2682731 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| |||||| | || || ||||| ||||| || || | |||||| | |||||||| | Sbjct 829811 CAAGATGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATC 829752 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | |||||| || || | |||||| ||||| ||||||||||| || || || || Sbjct 829751 CTCCGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTGA 829692 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 |||||| ||| |||| | | || || ||| | ||||||| |||| | || || Sbjct 829691 TCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTA 829632 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| ||||| || | || || || || ||||||||||| || Sbjct 829631 CAACATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 829581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935963321085