Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1 141 8e-29 seq4 116 3e-21 seq3 114 1e-20 >seq1 Length=4909981 Score = 141 bits (156), Expect = 8e-29 Identities = 172/230 (75%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| || || |||||| ||||||| | ||||| || || ||| Sbjct 2135896 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2135837 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| || || || ||| | || | ||| ||||| ||||| |||||||| ||| Sbjct 2135836 GACACTATTGA--CAATGTCAAGTCCAAGATTCAA-GACAAGGAAGGTATTCCACCAGAC 2135780 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | |||||||| || || ||||| ||||||| | || || || ||| Sbjct 2135779 CAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTAC 2135720 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||||||||||||||| | ||||| || | || | ||||| || Sbjct 2135719 AACATTCAAAAAGAATCCACATTGCATTTGGTTTTGAGATTGAGAGGTGG 2135670 Score = 125 bits (138), Expect = 6e-24 Identities = 151/201 (75%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || || ||||| || || |||||| ||||||| | ||||| || || || Sbjct 2136125 AATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTC 2136066 Query 25058 TGACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||||||| || || || ||| | || | ||| ||||| ||||| |||||||| || Sbjct 2136065 TGACACTATTGA--CAATGTCAAGTCCAAGATTCAA-GACAAGGAAGGTATTCCACCAGA 2136009 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| | | |||||||| || || || || ||||||| | || || || || Sbjct 2136008 CCAACAAAGATTGATTTTTGCTGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTA 2135949 Query 25175 CAATATTCAAAAAGAATCCAC 25195 ||| || |||||||||||||| Sbjct 2135948 CAACATCCAAAAAGAATCCAC 2135928 >seq4 Length=2685930 Score = 116 bits (128), Expect = 3e-21 Identities = 160/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || || |||||||| |||||| |||| || | ||||| || || || ||||| || Sbjct 2595166 TTCGTTAAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCATT 2595107 Query 25068 GAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124 || || || || | || | ||| ||||||||||| ||||||||||||||||| | Sbjct 2595106 GA--CAATGTCAAATCCAAGATTCAA-GACAAAGAAGGTATTCCACCTGACCAACAAAGA 2595050 Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184 | || ||||| || |||||||| ||||||| | || | || |||||||| ||| Sbjct 2595049 TTGATCTTTGCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAA 2594990 Query 25185 AAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||| || | ||||| || | || | ||||| || Sbjct 2594989 AAAGAATCTACTTTGCATTTGGTCTTGAGATTGAGAGGTGG 2594949 >seq3 Length=2682731 Score = 114 bits (126), Expect = 1e-20 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || || || ||||| |||| || | ||||| || || || Sbjct 829807 ATGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATCCTCC 829748 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||||| || || || || || ||| ||||||||||| ||||||||||| | Sbjct 829747 GACACTATTGA--CAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTGATC 829690 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || ||||| || |||||||| ||||||| | | ||| || || |||| Sbjct 829689 AACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACA 829630 Query 25177 ATATTCAAAAAGAATCCAC 25195 | || ||||| |||||||| Sbjct 829629 ACATCCAAAAGGAATCCAC 829611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327963031705