Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1 329 4e-85 >seq1 Length=4909981 Score = 329 bits (364), Expect = 4e-85 Identities = 560/803 (70%), Gaps = 23/803 (3%) Strand=Plus/Plus Query 92917 CAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAG 92976 ||||||||||||||| ||||| || | ||||||| |||||| | |||||||| || Sbjct 3917569 CAATAATCTATCAGCCACAAACTCAACGTACTGATTCATCAATGAAGCGTTCATTCCAAG 3917628 Query 92977 AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCT-TTCTCGATTACAACGGCTTCTTTCA 93035 | | |||| || || ||| |||| | | | || || ||| |||| || ||| | | Sbjct 3917629 CAAAGAAACAGATAATGCTTCG-TCAAAATAACGCTTTTCAATTTCAACCGCCTCTGTTA 3917687 Query 93036 AGATTTCTATTACTCTACTATTTGGT-----GGTTTTTGTACGACATAATTGTACATTAA 93090 |||| || || ||||||| ||||| | | | | || |||| ||| Sbjct 3917688 TTATTT----TA-TCAACTATTTCTGCATCAGGTTTGTTTTCCAAATGCGAATACAATAA 3917742 Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 || ||||| || ||||| | |||||| || || | |||||||||||| ||| || | Sbjct 3917743 ACAGGCAAAATCAGTATGAAGACCTTCATCGCGACAAATCAACTCATTGGAGAAAGTAAG 3917802 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | || |||| |||||||||||||||||| ||||| ||| ||| |||||||| Sbjct 3917803 ACCGGGCATAAGACCTCTTTTCTTGAGCCAAAATATCGAAGCGAAAGAACCGGAAAAAAA 3917862 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-CTGC 93269 ||||||||| ||||| |||||||| || | | ||| ||||| ||| | | || | Sbjct 3917863 TATACCTTCAACGGCAGCAAATGCTACTAATCTTTCAGCAAATAAAGCGTCTTCATCTTC 3917922 Query 93270 TGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 |||||| | | ||||| || ||||||| ||||| || || | ||| || || || | Sbjct 3917923 -AATCCATCTAAGCGCCCAGTCTGCTTTTTCTTTAATGCATGGAATTGTATCAATTGCAT 3917981 Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389 |||||| | || || || | ||| | || || ||||| || |||||||| || Sbjct 3917982 TAAATAAAAATTCGGCCTGTTCAGGATCCAGAATATAAGTATCTATCAACAGAGAGTATG 3918041 Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 | || ||||| ||||||||||| ||||| || || || || ||| | ||||| | | Sbjct 3918042 TCTCTGAATGAACATTCTCCATCATTATTTGAAAACCATAAAAGCATTTGGCTTCGGGAA 3918101 Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 |||| |||| ||| || ||| ||| ||||| ||||| || || ||||| ||||| | Sbjct 3918102 TCTGTACTTGGGTAGAGAAATTCTGTACAAGATTCTCATTAACGATGCCATCCGATGCGG 3918161 Query 93510 CaaaaaaaGC---CAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTA---T 93563 ||||||| || || | | | | ||| ||| |||| || | |||| | Sbjct 3918162 CAAAAAATGCTAGCACTCTGGAAATGAAAAACTGT---TCATTGCTATTCAACTTATAGT 3918218 Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623 |||||| | ||| || |||||| | ||| ||| | ||||| || || ||||||| Sbjct 3918219 TCCAATCATGCAAATCCTTACCAAGATCAATTTCCTCGGCGGTCCAGAAAGAAGCTTCTG 3918278 Query 93624 CTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAG 93683 ||||||||||||| | |||||| || || || | || ||||||| ||||| || || Sbjct 3918279 CTTTTTTGTACATTTGCCATATTTCATGGTACTTTATGGGAAATAATACAAAGCGCTTTT 3918338 Query 93684 GGTTATCTTTTAGTAACGGCTCT 93706 ||| ||||| |||| ||||||| Sbjct 3918339 TGTTTTCTTTGAGTATCGGCTCT 3918361 Score = 282 bits (312), Expect = 5e-71 Identities = 613/907 (68%), Gaps = 23/907 (3%) Strand=Plus/Plus Query 92783 TCTTATTCATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCT 92842 ||||| |||||||||| |||||||| || |||| | ||||||||||| || || | Sbjct 4604421 TCTTAGCCATAACACCAGCCTTTTGGTAGTCGGAAACTCTCTTTTCAAAGAAGTTAGTTT 4604480 Query 92843 TTCCTTCCAAAGATATCGAATTCACTA--GT-GATTGGATTCTTGGCGTTATAATACTTT 92899 | || ||||||| || | ||| || || || ||| || | | || ||| ||| Sbjct 4604481 TACCGGCCAAAGAAAT-GTTTTCCATAAAGTCGAATGGGTTGGTAACATTGTAAACCTTC 4604539 Query 92900 TCACCGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAA 92959 | | ||| | ||| ||||| ||||| |||||||| | || || ||||||| Sbjct 4604540 TTGTTGCCCAAAGCAACCAACAATCTGTCAGCAACAAATTCAACATATTGGCACATCAAT 4604599 Query 92960 TCACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATT 93019 | | ||||| || | |||| || || | ||| ||||| ||| | ||||| || || Sbjct 4604600 TTAGCGTTCATGCCCAAAAGAGAAACTGGCAAAGCATCGGTAAAGTATTCTTTTTCAATA 4604659 Query 93020 ACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTT---TTGTACGACA 93076 || || || | | || | | || || |||| || ||| |||| || Sbjct 4604660 GTGACAGCCTCGGTAATAATCTTT-----TCAACAATTTCTTGATTTGGTTTGTTTTGCA 4604714 Query 93077 TAATTGT----ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAA 93132 | ||| ||| ||||| || ||||||||||| |||||||| |||| | ||||| Sbjct 4604715 --AGTGTGAAAACAACAAGCAAGCGAAGTCGGTATGCAAACCTTCATCTCTGCAAATCAA 4604772 Query 93133 CTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGC 93192 ||||| ||| ||||||||||| | || |||| || || | |||||| || ||||| Sbjct 4604773 TTCATTAGAGAAGGTTAAACCTGGCATCATACCTCTCTTTTTTAACCAAAAGATAGAAGC 4604832 Query 93193 AAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAA 93252 |||| |||||| || || |||||||| || || ||||| || || | | |||| |||| Sbjct 4604833 AAAAGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACCAATCTTTCGCCAAA 4604892 Query 93253 ATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGG 93312 || | | |||||||| | || ||||| || ||||||||||||||||| || Sbjct 4604893 CAAAGCTTGGTCATCATTGATCCATCTCAATGCCCAGTCAGCTTTTTTCTTAATACATGG 4604952 Query 93313 TAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATC 93372 | ||||| ||||| ||||| | | | || || | | ||| || || ||||| Sbjct 4604953 GATAGTTTCAATAGCATTAAACAAGAATTCAGATTCTTTTGGATCCTTAATATAAGTATC 4605012 Query 93373 GATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAA 93432 || |||| |||||| |||||||||| | || ||||| |||||||| |||||||| Sbjct 4605013 AATCAACAAAGAATAAGTTTCAGAATGTATGTTTTCCATCATGATTTGGAAACCGTAGAA 4605072 Query 93433 ACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGAC 93492 |||| | ||||| | || ||||| ||| || | || || | ||||| || || Sbjct 4605073 ACATTTGGCTTCTGGACATTGAACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCGTTAAC 4605132 Query 93493 TATACCATCGGATGCTGCaaaaaaaGCCAATA-TATGCTTTATAAAATGTTTCTCATCAT 93551 ||||| || || ||||| || ||||| | | || || |||| | | |||| | Sbjct 4605133 GATACCGTCACTAGCAGCAAAGAATGCCAAGACTCTG-GAAATGAAATATCTTTCATTAG 4605191 Query 93552 C-TTTAAGC--TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCC 93608 | || || | || | ||| ||| | |||||| | || | |||||| |||||| Sbjct 4605192 CATTCAATCTGTTGTTCCAGTCGTGCAAATCTTTACTCAAGTCAATTTCTTCAGCAGTCC 4605251 Query 93609 AAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATA 93668 |||| || ||||| || || |||||||| | ||| || || ||||| | ||||| | | Sbjct 4605252 AAAAAGAGGCTTCAGCCTTCTTGTACATTTGCCAGATTTCATGATACTTGATTGGCATCA 4605311 Query 93669 TGACAAA 93675 |||||| Sbjct 4605312 AGACAAA 4605318 Score = 208 bits (230), Expect = 8e-49 Identities = 587/897 (65%), Gaps = 42/897 (5%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| ||||||||| || ||| | ||||||||||| || ||||| || | Sbjct 4056761 CATAACACCAGCTTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGC 4056702 Query 92850 CAA--AGATATC------GAATTCACTAGTGATTGGATTCTTGGCGTTATAA---TACTT 92898 || |||||| ||| ||| | |||||| || |||| || | ||| Sbjct 4056701 TAATGAGATATTTTCCATGAAATCA------AATGGATTGTTAACGTTGTACACCTTCTT 4056648 Query 92899 TTCACCGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAA 92958 | ||| | || | ||| ||||| ||||| || || |||| || || |||| || Sbjct 4056647 GTTACCCAATGACAC---CAACAATCTGTCAGCAACGAACTCTACATATTGGCACATTAA 4056591 Query 92959 ATCACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGAT 93018 |||||||| || | | || || | || || || || | ||||| || || Sbjct 4056590 TGTGCAATTCATACCCAACAATGAAACTGGCAAGGCATCAGTGAAATACTCTTTTTCAAT 4056531 Query 93019 TACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTT-----GGTGGTTTTTGTACG 93073 |||| ||||| | | || | | || || |||| ||||| || | | | Sbjct 4056530 ATCAACTGCTTCAGTGATAATCTTT-----TCAACAATTTCTGCAGGTGGCTTGTTTTCC 4056476 Query 93074 ACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAAC 93133 | || ||| || || |||||||| || || |||||||| |||| || || | Sbjct 4056475 AAATGGGAAAACAACAAACAGGCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGT 4056416 Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 || ||| ||| || || ||||| | || || | || || | ||| || || |||||| Sbjct 4056415 TCGTTGGAGAAAGTCAACCCTGGCATCAAACCCCTCTTTTTCAACCAGAAGATGGAAGCA 4056356 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253 ||| |||||| || || |||||||| || || ||||| || || | | ||| |||| Sbjct 4056355 AAAGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAAT 4056296 Query 93254 TTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313 || || | | |||||||| | |||||||| ||||||||| ||| ||||| || Sbjct 4056295 AAAGCCTCATCATCGTTGATCCATCTCAAAGCCCAGTCGGCTTTTG-CTTTATACATGGG 4056237 Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCG 93373 | ||||| || || || |||| | || || | | || ||||| ||||| Sbjct 4056236 ATAGTTTCAATGGCATTGAATAAAAATTCAGATTCTTTTGGGTCCTTGATGTAAGTATCA 4056177 Query 93374 ATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAA 93433 |||| || ||| || ||||||| || | ||| ||||| ||||||||| || || || Sbjct 4056176 ATTAGCAAAGAGTAAGTTTCAGAGTGAATATTTTCCATCATAATTTGGAAACCATAAAAG 4056117 Query 93434 CATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACT 93493 || | ||||| | |||||||| ||| || | || || | ||||||||||| Sbjct 4056116 AATTTGGCTTCTGGACATTGCACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCATTGACA 4056057 Query 93494 ATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATA----AAATGTTTCTCATC 93549 |||||||| || ||||| |||||||| | || || | |||| | | || | Sbjct 4056056 ATACCATCACTAGCAGCAAAGAAAGCCAACA----CTCTAGAGAGGAAATATCTTTCGTT 4056001 Query 93550 ATCTTTAAGCTT---ATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGT 93606 | || | ||| || ||| || | |||||| | |||| ||||| |||| Sbjct 4056000 GGCATTCAACTTGTCATTCCAGTCATGCATATCTTTACTCAAGTCGATCTCTTCAGCAGT 4055941 Query 93607 CCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGG 93663 ||| || || ||||| || || |||||||| | |||||| || ||||||| ||||| Sbjct 4055940 CCAGAATGAAGCTTCAGCCTTCTTGTACATTTGCCATATTTCATGATATTTGATTGG 4055884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860751274680